A7MZW2 (A7MZW2_VIBHB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Uncharacterized protein EMBL ABU72013.1

Gene names

Ordered Locus Names:

VIBHAR_03063 EMBL ABU72013.1

Organism

Vibrio harveyi (strain ATCC BAA-1116 / BB120) [Complete proteome] [HAMAP] EMBL ABU72013.1

Taxonomic identifier

338187 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio › Vibrio harveyi group › Vibrio harveyi

Protein attributes

Sequence length	464 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A7MZW2 [UniParc]. Last modified October 2, 2007. Version 1. Checksum: BAFB5AE3BCADFD05	FASTA	464	52,580
	10 20 30 40 50 60 MPLHKKSALK GSILDDVYCS KDLSIVMPKY RIPENEHAAS HAYQVVHDEL MLDGNSRQNL 70 80 90 100 110 120 ATFCQTWAED EVHKLMDECI DKNMIDKDEY PQTAEIESRC VHMLADLWHA PHAENPMGCS 130 140 150 160 170 180 TTGSSEAAML GGMALKWAWR EKMKKQGKPT DRPNLICGPV QVCWHKFARY WDIELREIPM 190 200 210 220 230 240 QGDRLIMTPE EVIKRCDENT IGVVPTLGVT FTCQYEPVKE VHDALDRLQE ETGLDIPIHV 250 260 270 280 290 300 DGASGAFLAP FCDPDLVWDF RLPRVKSINA SGHKFGLSPL GVGWVVWRDA DALHEDLIFN 310 320 330 340 350 360 VNYLGGNMPT FALNFSRPGG QIVAQYYNFL RLGREGYRKI HEACYDTARY LAQEIEKMGM 370 380 390 400 410 420 FHIIYDGHGG IPALSWSIKE GANPGFNLYD LSDRIRSRGW QIAAYAMPAE REDLVIMRIL 430 440 450 460 VRHGFSRDLA DLLITDLQHC VDFFDKHPVV NGSDADESSN FNHG

References

[1]

The Vibrio harveyi Genome Sequencing Project Bassler B., Clifton S.W., Fulton L., Delehaunty K., Fronick C., Harrison M., Markivic C., Fulton R., Tin-Wollam A.-M., Shah N., Pepin K., Nash W., Thiruvilangam P., Bhonagiri V., Waters C., Tu K.C., Irgon J., Wilson R.K. Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-1116 / BB120.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000789 Genomic DNA. Translation: ABU72013.1.
RefSeq	YP_001446241.1. NC_009783.1.
3D structure databases
ProteinModelPortal	A7MZW2.
SMR	A7MZW2. Positions 8-448.
ModBase	Search...
Protein-protein interaction databases
STRING	338187.VIBHAR_03063.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABU72013; ABU72013; VIBHAR_03063.
GeneID	5553098.
KEGG	vha:VIBHAR_03063.
PATRIC	20132772. VBIVibHar24526_2916.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0076.
HOGENOM	HOG000070228.
KO	K01580.
OMA	PMDKEHM.
ProtClustDB	CLSK928485.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A7MZW2_VIBHB

Accession

Primary (citable) accession number: A7MZW2

Entry history

Integrated into UniProtKB/TrEMBL:	October 2, 2007
Last sequence update:	October 2, 2007
Last modified:	May 1, 2013
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)