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A7MZW2

- A7MZW2_VIBCB

UniProt

A7MZW2 - A7MZW2_VIBCB

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Protein

Glutamate decarboxylase

Gene

VIBHAR_03063

Organism
Vibrio campbellii (strain ATCC BAA-1116 / BB120)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

Note: Pyridoxal phosphate.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciVHAR338187:GJCH-3054-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:VIBHAR_03063Imported
ORF Names:M892_15715Imported
OrganismiVibrio campbellii (strain ATCC BAA-1116 / BB120)Imported
Taxonomic identifieri338187 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000008152: Chromosome I

Interactioni

Protein-protein interaction databases

STRINGi338187.VIBHAR_03063.

Structurei

3D structure databases

ProteinModelPortaliA7MZW2.
SMRiA7MZW2. Positions 8-448.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000070228.
KOiK01580.
OrthoDBiEOG6TFCPW.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

A7MZW2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPLHKKSALK GSILDDVYCS KDLSIVMPKY RIPENEHAAS HAYQVVHDEL
60 70 80 90 100
MLDGNSRQNL ATFCQTWAED EVHKLMDECI DKNMIDKDEY PQTAEIESRC
110 120 130 140 150
VHMLADLWHA PHAENPMGCS TTGSSEAAML GGMALKWAWR EKMKKQGKPT
160 170 180 190 200
DRPNLICGPV QVCWHKFARY WDIELREIPM QGDRLIMTPE EVIKRCDENT
210 220 230 240 250
IGVVPTLGVT FTCQYEPVKE VHDALDRLQE ETGLDIPIHV DGASGAFLAP
260 270 280 290 300
FCDPDLVWDF RLPRVKSINA SGHKFGLSPL GVGWVVWRDA DALHEDLIFN
310 320 330 340 350
VNYLGGNMPT FALNFSRPGG QIVAQYYNFL RLGREGYRKI HEACYDTARY
360 370 380 390 400
LAQEIEKMGM FHIIYDGHGG IPALSWSIKE GANPGFNLYD LSDRIRSRGW
410 420 430 440 450
QIAAYAMPAE REDLVIMRIL VRHGFSRDLA DLLITDLQHC VDFFDKHPVV
460
NGSDADESSN FNHG
Length:464
Mass (Da):52,580
Last modified:October 2, 2007 - v1
Checksum:iBAFB5AE3BCADFD05
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000789 Genomic DNA. Translation: ABU72013.1.
CP006605 Genomic DNA. Translation: AGU96887.1.
RefSeqiWP_012128575.1. NC_022269.1.
YP_001446241.1. NC_009783.1.
YP_008527809.1. NC_022269.1.

Genome annotation databases

EnsemblBacteriaiABU72013; ABU72013; VIBHAR_03063.
AGU96887; AGU96887; M892_15715.
GeneIDi16817307.
5553098.
KEGGivca:M892_15715.
vha:VIBHAR_03063.
PATRICi20132772. VBIVibHar24526_2916.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000789 Genomic DNA. Translation: ABU72013.1 .
CP006605 Genomic DNA. Translation: AGU96887.1 .
RefSeqi WP_012128575.1. NC_022269.1.
YP_001446241.1. NC_009783.1.
YP_008527809.1. NC_022269.1.

3D structure databases

ProteinModelPortali A7MZW2.
SMRi A7MZW2. Positions 8-448.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 338187.VIBHAR_03063.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABU72013 ; ABU72013 ; VIBHAR_03063 .
AGU96887 ; AGU96887 ; M892_15715 .
GeneIDi 16817307.
5553098.
KEGGi vca:M892_15715.
vha:VIBHAR_03063.
PATRICi 20132772. VBIVibHar24526_2916.

Phylogenomic databases

eggNOGi COG0076.
HOGENOMi HOG000070228.
KOi K01580.
OrthoDBi EOG6TFCPW.

Enzyme and pathway databases

BioCyci VHAR338187:GJCH-3054-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
InterProi IPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view ]
PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-1116Imported and ATCC BAA-1116 / BB120Imported.
  2. "Vibrio campbellii hmgA-mediated pyomelanization impairs quorum sensing, virulence, and cellular fitness."
    Wang Z., Lin B., Mostaghim A., Rubin R.A., Glaser E.R., Mittraparp-Arthorn P., Thompson J.R., Vuddhakul V., Vora G.J.
    Front. Microbiol. 4:379-379(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC BAA-1116Imported.

Entry informationi

Entry nameiA7MZW2_VIBCB
AccessioniPrimary (citable) accession number: A7MZW2
Entry historyi
Integrated into UniProtKB/TrEMBL: October 2, 2007
Last sequence update: October 2, 2007
Last modified: November 26, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3