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Protein
Submitted name:

Uncharacterized protein

Gene

VIBHAR_00157

Organism
Vibrio campbellii (strain ATCC BAA-1116 / BB120)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi167 – 186H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:VIBHAR_00157Imported
OrganismiVibrio campbellii (strain ATCC BAA-1116 / BB120)Imported
Taxonomic identifieri338187 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
Proteomesi
  • UP000008152 Componenti: Chromosome I

Subcellular locationi

GO - Cellular componenti

  • intracellular Source: GOC
  • protein-DNA complex Source: CollecTF

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei584-aspartylphosphatePROSITE-ProRule annotation1

Expressioni

Gene expression databases

CollecTFiEXPREG_00000290.

Interactioni

Protein-protein interaction databases

STRINGi338187.VIBHAR_00157.

Structurei

3D structure databases

ProteinModelPortaliA7MXJ7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 123Response regulatoryInterPro annotationAdd BLAST118
Domaini143 – 208HTH luxR-typeInterPro annotationAdd BLAST66

Phylogenomic databases

eggNOGiENOG4108W5X. Bacteria.
COG2197. LUCA.
HOGENOMiHOG000034813.
OMAiVHLANIF.

Family and domain databases

CDDicd06170. LuxR_C_like. 1 hit.
cd00156. REC. 1 hit.
Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR011006. CheY-like_superfamily.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR000792. Tscrpt_reg_LuxR_C.
IPR036388. WH-like_DNA-bd_sf.
PfamiView protein in Pfam
PF00196. GerE. 1 hit.
PF00072. Response_reg. 1 hit.
PRINTSiPR00038. HTHLUXR.
SMARTiView protein in SMART
SM00421. HTH_LUXR. 1 hit.
SM00448. REC. 1 hit.
SUPFAMiSSF52172. SSF52172. 1 hit.
PROSITEiView protein in PROSITE
PS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.

Sequencei

Sequence statusi: Complete.

A7MXJ7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDSTYTIIIA DDHPLFRNAL FQSVHMAVSG ANLLEADTLD ALLALLEKEE
60 70 80 90 100
EPDLVLLDLK MPGANGMSGL IHLRAEYPDI PVVVVSASEE SSVVTQVKSH
110 120 130 140 150
GAFGFIPKSS DMRELVNALN QVLNGDPYFP EGLITNNAAC NDLAEKIAAL
160 170 180 190 200
TPQQYKVLGM LSDGLLNKQI AYELNVSEAT IKAHMTAIFR KLGVKNRTQA
210
VILLQQMEPE Q
Length:211
Mass (Da):23,016
Last modified:October 2, 2007 - v1
Checksum:iC1A0B2E0A0CD7A04
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000789 Genomic DNA. Translation: ABU69205.1.
RefSeqiWP_005428786.1. NC_022269.1.

Genome annotation databases

EnsemblBacteriaiABU69205; ABU69205; VIBHAR_00157.
GeneIDi5555173.
KEGGivca:M892_11820.
vha:VIBHAR_00157.
PATRICifig|338187.25.peg.2375.

Similar proteinsi

Entry informationi

Entry nameiA7MXJ7_VIBCB
AccessioniPrimary (citable) accession number: A7MXJ7
Entry historyiIntegrated into UniProtKB/TrEMBL: October 2, 2007
Last sequence update: October 2, 2007
Last modified: December 20, 2017
This is version 76 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported