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Protein
Submitted name:

Uncharacterized protein

Gene

VIBHAR_02632

Organism
Vibrio campbellii (strain ATCC BAA-1116 / BB120)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciVHAR338187:GJCH-2622-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:VIBHAR_02632Imported
OrganismiVibrio campbellii (strain ATCC BAA-1116 / BB120)Imported
Taxonomic identifieri338187 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000008152 Componenti: Chromosome I

Interactioni

Protein-protein interaction databases

STRINGi338187.VIBHAR_02632.

Structurei

3D structure databases

ProteinModelPortaliA7MSH5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiSEEAHYC.
OrthoDBiEOG6MSRZP.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

A7MSH5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVKEQKTADV SFESLLKIFT IPEGPDSTLT KIDESLSQNL NQFLREHIVA
60 70 80 90 100
EEKPLHEIEK DFSSAQIPEQ PEFVSDHTEH LLDTLVSHSV HTSAPSFIGH
110 120 130 140 150
MTSALPYFLM PLSKIMIALN QNLVKIETSK AFTPLERQVL GMLHRLIYGQ
160 170 180 190 200
DDKFYAKWMH SAKHSLGAFC SGGTIANITA LWVARNKALK ANGAFKGVEK
210 220 230 240 250
EGLFKAMKHY GYEGLAILVS ERGHYSLKKA ADVLGLGQEG LVAVKTDANN
260 270 280 290 300
RIIVDDLKVK IAELEAQNIK PIAVVGVAGT TETGSVDPLA QIAEVCAEHN
310 320 330 340 350
CHFHVDAAWG GATLMSNHHR HLLDGVELAD SVTIDAHKQL YIPMGAGMVL
360 370 380 390 400
FKDPDAMKSI EHHAQYILRK GSKDLGSHTL EGSRSGMAML VYAAMHIISR
410 420 430 440 450
PGYELLIDQS IAKARYFADL INQQEDFELV SEPELCLLTY RYLPTHMRAA
460 470 480 490 500
LEKAQGTQKE KLNELLNQLT QFIQKRQRET GKSFVSRTRL NPDQWQRMNT
510 520 530 540
IVFRVVLANP LTTNDILNAV LDEQREIALQ APSLMAKIEE TVEDILNS
Length:548
Mass (Da):61,061
Last modified:October 2, 2007 - v1
Checksum:i1B7C908A19876772
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000789 Genomic DNA. Translation: ABU71593.1.
RefSeqiWP_012128246.1. NC_009783.1.

Genome annotation databases

EnsemblBacteriaiABU71593; ABU71593; VIBHAR_02632.
KEGGivha:VIBHAR_02632.
PATRICi20131948. VBIVibHar24526_2512.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000789 Genomic DNA. Translation: ABU71593.1.
RefSeqiWP_012128246.1. NC_009783.1.

3D structure databases

ProteinModelPortaliA7MSH5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi338187.VIBHAR_02632.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABU71593; ABU71593; VIBHAR_02632.
KEGGivha:VIBHAR_02632.
PATRICi20131948. VBIVibHar24526_2512.

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiSEEAHYC.
OrthoDBiEOG6MSRZP.

Enzyme and pathway databases

BioCyciVHAR338187:GJCH-2622-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-1116 / BB120Imported.

Entry informationi

Entry nameiA7MSH5_VIBCB
AccessioniPrimary (citable) accession number: A7MSH5
Entry historyi
Integrated into UniProtKB/TrEMBL: October 2, 2007
Last sequence update: October 2, 2007
Last modified: May 27, 2015
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.