Skip Header

Contribute Send feedback
Read comments (?) or add your own

A7MS61 (FADJ_VIBHB) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Fatty acid oxidation complex subunit alpha

Including the following 2 domains:

  1. Enoyl-CoA hydratase/3-hydroxybutyryl-CoA epimerase
    EC=4.2.1.17
    EC=5.1.2.3
  2. 3-hydroxyacyl-CoA dehydrogenase
    EC=1.1.1.35
Gene names
Name:fadJ
Ordered Locus Names:VIBHAR_03120
OrganismVibrio harveyi (strain ATCC BAA-1116 / BB120) [Complete proteome] [HAMAP]
Taxonomic identifier338187 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio ›

Protein attributes

Sequence length704 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities By similarity. HAMAP-Rule MF_01617

Catalytic activity

(3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H2O. HAMAP-Rule MF_01617

(S)-3-hydroxyacyl-CoA + NAD+ = 3-oxoacyl-CoA + NADH. HAMAP-Rule MF_01617

(S)-3-hydroxybutanoyl-CoA = (R)-3-hydroxybutanoyl-CoA. HAMAP-Rule MF_01617

Pathway

Lipid metabolism; fatty acid beta-oxidation. HAMAP-Rule MF_01617

Subunit structure

Heterotetramer of two alpha chains (FadJ) and two beta chains (FadI) By similarity.

Subcellular location

Cytoplasm By similarity.

Sequence similarities

In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.

In the central section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 704704Fatty acid oxidation complex subunit alpha HAMAP-Rule MF_01617
PRO_1000069490

Regions

Region1 – 190190Enoyl-CoA hydratase By similarity
Region308 – 7043973-hydroxyacyl-CoA dehydrogenase By similarity

Sites

Site1181Important for catalytic activity By similarity
Site1401Important for catalytic activity By similarity

Sequences

Sequence LengthMass (Da)Tools
A7MS61 [UniParc].

Last modified October 2, 2007. Version 1.
Checksum: C9C2C71B9D3797A0

FASTA70476,776
        10         20         30         40         50         60 
MSEQKAFSLK IDEQNIAWLA IDVPNEKMNT LQAAFADEMK EIFAQLKDTS GVKGMVIHSL 

        70         80         90        100        110        120 
KPDNFVAGAD VRMLEACTTA SEAEALAKQG QELFQQLSDL PYPVVAAIHG PCLGGGLELA 

       130        140        150        160        170        180 
LACDYRVCTD SDKTRLGLPE VQLGLLPGSG GTQRLPRLIG LLPSLDLILT GKQLRAKKAK 

       190        200        210        220        230        240 
KLGVVDACVP ETVLLDIAKM HVEKGKKKGK QKQSTKEKLM SGSGLGRKFV FEQAAKKTNE 

       250        260        270        280        290        300 
KTRGNYPATV AILEVIQHGL EKGFAQGQEL EAKRFGELVM SSESKALRSI FFATTEMKKE 

       310        320        330        340        350        360 
NGAEAEPTAV NKVGVLGGGL MGAGISHVSV AKAKVPVRIK DVSNDGVLNA LNYNYKLFEK 

       370        380        390        400        410        420 
QRKRRIISKA GLQSKMLQLS GGIDFTSFNH IDVVIEAVFE DLDLKQAMVA DIEANAKPET 

       430        440        450        460        470        480 
IFATNTSSLP IHKIAEKAER PENIVGLHYF SPVEKMPLVE VIPHETTSEE TISTVVALAK 

       490        500        510        520        530        540 
KQGKTPIVVK DKAGFYVNRI LAPYMNEAAH ILLANEPIEQ LDGALLDFGF PVGPITLLDE 

       550        560        570        580        590        600 
VGVDIGAKIM PILVNELGER FKGPDVFDTL LNDGRKGRKT GKGFYTYKGK KKEVDKSVYK 

       610        620        630        640        650        660 
LLNLTPESKL SDNDIALRCV LPMLNEAVRC LDDGIIRSPR DGDIGAIFGI GFPPFLGGPF 

       670        680        690        700 
CYMDQFGLKE LVEKMNEFAS KYGDRYAPCD GLLTRAGEGR NFYD

« Hide

References

[1]The Vibrio harveyi Genome Sequencing Project
Bassler B., Clifton S.W., Fulton L., Delehaunty K., Fronick C., Harrison M., Markivic C., Fulton R., Tin-Wollam A.-M., Shah N., Pepin K., Nash W., Thiruvilangam P., Bhonagiri V., Waters C., Tu K.C., Irgon J., Wilson R.K.
Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-1116 / BB120.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000789 Genomic DNA. Translation: ABU72069.1.
RefSeqYP_001446296.1. NC_009783.1.

3D structure databases

ProteinModelPortalA7MS61.
ModBaseSearch...

Protein-protein interaction databases

STRING338187.VIBHAR_03120.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABU72069; ABU72069; VIBHAR_03120.
GeneID5553806.
KEGGvha:VIBHAR_03120.
PATRIC20132879. VBIVibHar24526_2969.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1250.
HOGENOMHOG000261346.
KOK01782.
OMASPKRDKG.
ProtClustDBPRK11154.

Enzyme and pathway databases

UniPathwayUPA00659.

Family and domain databases

Gene3D1.10.1040.10. 2 hits.
3.40.50.720. 1 hit.
HAMAPMF_01617. FadJ.
InterProIPR006180. 3-OHacyl-CoA_DH_CS.
IPR006176. 3-OHacyl-CoA_DH_NAD-bd.
IPR006108. 3HC_DH_C.
IPR008927. 6-PGluconate_DH_C-like.
IPR001753. Crotonase_core_superfam.
IPR013328. DH_multihelical.
IPR018376. Enoyl-CoA_hyd/isom_CS.
IPR012802. FadJ.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PfamPF00725. 3HCDH. 2 hits.
PF02737. 3HCDH_N. 1 hit.
PF00378. ECH. 1 hit.
[Graphical view]
SUPFAMSSF48179. 6DGDH_C_like. 2 hits.
TIGRFAMsTIGR02440. FadJ. 1 hit.
PROSITEPS00067. 3HCDH. 1 hit.
PS00166. ENOYL_COA_HYDRATASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameFADJ_VIBHB
AccessionPrimary (citable) accession number: A7MS61
Entry history
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: October 2, 2007
Last modified: May 1, 2013
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents