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Reviewed, UniProtKB/Swiss-Prot A7MKD3 (DADA_ENTS8)

Last modified June 16, 2009. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    D-amino acid dehydrogenase small subunit
    EC=1.4.99.1
Gene names
Name: dadA
Ordered Locus Names: ESA_01469
OrganismEnterobacter sakazakii (strain ATCC BAA-894) [Complete proteome] [HAMAP]
Taxonomic identifier290339 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeCronobacter

Protein attributes

Sequence length432 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Function

Oxidative deamination of D-amino acids By similarity.

Catalytic activity

A D-amino acid + H2O + acceptor = a 2-oxo acid + NH3 + reduced acceptor. HAMAP MF_01202

Cofactor

FAD By similarity.

Pathway

Amino-acid degradation; D-alanine degradation; NH(3) and pyruvate from D-alanine: step 1/1. HAMAP MF_01202

Subunit structure

Heterodimer of a small and a large subunit By similarity.

Sequence similarities

Belongs to the dadA oxidoreductase family.

Ontologies

Keywords
   LigandFAD
Flavoprotein
   Molecular functionOxidoreductase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processalanine catabolic process

Inferred from electronic annotation. Source: HAMAP

oxidation reduction

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functionD-amino-acid dehydrogenase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 432432D-amino acid dehydrogenase small subunit HAMAP MF_01202
PRO_1000066094

Regions

Nucleotide binding3 – 1715FAD Potential

Sequences

Sequence LengthMass (Da)Tools
A7MKD3-1 [UniParc].

Last modified October 2, 2007. Version 1.
Checksum: 196877CD56892737

FASTA43247,402
        10         20         30         40         50         60 
MHVVVLGSGV VGVASAWYLR QAGHEVTVID REPGPALETS AANAGQISPG YAAPWAAPGV 

        70         80         90        100        110        120 
PLKAIKWMFQ RHAPLAISLD GTHFQLKWMW QMLRNCDTRH YMQNKGRMVR LAEYSRDCLK 

       130        140        150        160        170        180 
ALRESTGIQY EGRQGGTLQL FRTEQQYENA SRDIAVLESE GVPFRLLKAA ELAQVEPALA 

       190        200        210        220        230        240 
DVAHKLTGGL QLPNDETGDC QLFTTRLAQM AEAAGVVFRY NTPVDRLLSE GQRIYGVKCG 

       250        260        270        280        290        300 
DEVIKADGYV MAFGSYSTAM LKGIVDIPVY PLKGYSLTIP IADESGAPVS TVLDETYKIA 

       310        320        330        340        350        360 
ITRFDNRIRV GGMAEIVGFN TELLKPRQET LEMVVRDLYP RGGHIEQAKF WTGLRPMTPD 

       370        380        390        400        410        420 
GTPVVGRTEF KNLWLNTGHG TLGWTMACGS GQLLSDIISG RTPAIPFEDL SVARYAPGFT 

       430 
PSSSHRLHGA HP 

« Hide

References

[1]McClelland M., Sanderson E.K., Porwollik S., Spieth J., Clifton W.S., Fulton B., Wollam A., Shah N., Pepin K., Bhonagiri V., Nash W., Johnson M., Thiruvilangam P., Wilson R.
Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

CP000783 Genomic DNA. Translation: ABU76727.1.
RefSeqYP_001437563.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID5552319.
GenomeReviewsGene locus ESA_01469 in contig CP000783_GR.
KEGGesa:ESA_01469.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAA7MKD3. MFQKHAP.

Family and domain databases

HAMAPMF_01202.
[Tree]
InterProIPR006076. FAD-dep_OxRdtase.
[Graphical view]
PfamPF01266. DAO. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameDADA_ENTS8
AccessionPrimary (citable) accession number: A7MKD3
Entry history
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: October 2, 2007
Last modified: June 16, 2009
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents