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Protein
Submitted name:

Sec22bb protein

Gene

sec22bb

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Sec22bb proteinImported
Submitted name:
Vesicle-trafficking protein SEC22b-BImported
Gene namesi
Name:sec22bbImported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 8

Organism-specific databases

ZFINiZDB-GENE-030131-5488 sec22bb

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei197 – 218HelicalSequence analysisAdd BLAST22

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSDARG00000100435
ExpressionAtlasiA0A0R4IQP5 baseline and differential

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000089469

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 123LonginInterPro annotationAdd BLAST118
Domaini138 – 198V-SNARE coiled-coil homologyInterPro annotationAdd BLAST61

Sequence similaritiesi

Belongs to the synaptobrevin family.SAAS annotation

Keywords - Domaini

Coiled coilPROSITE-ProRule annotation, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG0862 Eukaryota
COG5143 LUCA
GeneTreeiENSGT00510000046833
HOGENOMiHOG000044957
HOVERGENiHBG052748
OMAiMLCASVD
OrthoDBiEOG091G0MPE
TreeFamiTF105933

Family and domain databases

InterProiView protein in InterPro
IPR011012 Longin-like_dom_sf
IPR010908 Longin_dom
IPR001388 Synaptobrevin
PfamiView protein in Pfam
PF13774 Longin, 1 hit
PF00957 Synaptobrevin, 1 hit
SMARTiView protein in SMART
SM01270 Longin, 1 hit
SUPFAMiSSF64356 SSF64356, 1 hit
PROSITEiView protein in PROSITE
PS50859 LONGIN, 1 hit
PS50892 V_SNARE, 1 hit

Sequencei

Sequence statusi: Complete.

A7MCK9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVLLTMIARL ADGLPLAASM QEDEQGSEKM GRDLQQYQSQ AKQLFRKLNE
60 70 80 90 100
QSPNRCTLEA GSMSFHYVIE KGVCYLVLCE AGFPKKLAFA YLEDLQAEFH
110 120 130 140 150
EQHGKKVPTV SRPYSFIEFD TYIQKTKKSY IDSRARRNLS NINTELQDVQ
160 170 180 190 200
RIMVANIEEV LQRGEALSAL DSKASNLSSL SKKYRSDAKY LNTRSTYAKL
210
AAGGVFFIML IVYIRFWWL
Length:219
Mass (Da):25,091
Last modified:October 2, 2007 - v1
Checksum:iDAA0A1984AA2B8E6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT573380 Genomic DNA No translation available.
BC152220 mRNA Translation: AAI52221.1
RefSeqiNP_001315455.1, NM_001328526.1
UniGeneiDr.151360
Dr.3020

Genome annotation databases

EnsembliENSDART00000158859; ENSDARP00000137821; ENSDARG00000100435
GeneIDi327277

Similar proteinsi

Entry informationi

Entry nameiA7MCK9_DANRE
AccessioniPrimary (citable) accession number: A7MCK9
Secondary accession number(s): A0A0R4IQP5
Entry historyiIntegrated into UniProtKB/TrEMBL: October 2, 2007
Last sequence update: October 2, 2007
Last modified: June 20, 2018
This is version 89 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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