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A7LR39 (A7LR39_BACO1) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length465 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL EDO14069.1

Ontologies

Keywords
   LigandChloride PDB 4HW6
   Technical term3D-structure PDB 4HW6
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Binding site1711Chloride 1; via amide nitrogen PDB 4HW6
Binding site1971Chloride 1 PDB 4HW6
Binding site3121Chloride 2; via amide nitrogen PDB 4HW6
Binding site3461Chloride 4; via amide nitrogen PDB 4HW6
Binding site3861Chloride 3; via amide nitrogen PDB 4HW6
Binding site4221Chloride 5; via amide nitrogen PDB 4HW6

Sequences

Sequence LengthMass (Da)Tools
A7LR39 [UniParc].

Last modified October 2, 2007. Version 1.
Checksum: EA8FBE575981102C

FASTA46552,486
        10         20         30         40         50         60 
MIQVTRRHVF SKALLQKTLF VAGLVLFSSC YKGSTLDVNQ DSGTPFNPKE EIVVEKFLPT 

        70         80         90        100        110        120 
EGRKGTRVVV YGRNFGNDVS KVKVTIGGYP AKVINVKGES LLCICPSKAY EGDVKVSVVG 

       130        140        150        160        170        180 
DDEAELKSGV CEAKFDYQYN YVVTTFLGKL YENNTKWDVL AGPFDDCGAF DNIWRMMFDP 

       190        200        210        220        230        240 
NSNYDDLYWV GQRDAFRHVD FVNQYVDIKT TNIGQCADVN FTLNGDMVVV DDQSSDTNTG 

       250        260        270        280        290        300 
IYLFTRASGF TERLSLCNAR GAKTCAVHPQ NGKIYYTRYH HAMISSYDPA TGTLTEEEVM 

       310        320        330        340        350        360 
MDTKGSNFHI VWHPTGDWAY IIYNGKHCIY RVDYNRETGK LAVPYIVCGQ HSSPGWVDGM 

       370        380        390        400        410        420 
GTGARLWGPN QGIFVKNEAY AGEEDEYDFY FCDRDSHTVR VLTPEGRVTT YAGRGNSREW 

       430        440        450        460 
GYVDGELRSQ ALFNHPTSIA YDMKRKCFYI GDCDNHRVRK IAPEE 

« Hide

References

[1]Fulton L., Clifton S., Fulton B., Xu J., Minx P., Pepin K.H., Johnson M., Thiruvilangam P., Bhonagiri V., Nash W.E., Mardis E.R., Wilson R.K.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 8483 EMBL EDO14069.1.
[2]"Draft genome sequence of Bacteroides ovatus (ATCC 8483)."
Sudarsanam P., Ley R., Guruge J., Turnbaugh P.J., Mahowald M., Liep D., Gordon J.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 8483 EMBL EDO14069.1.
[3]"Crystal structure of a hypothetical protein (BACOVA_00264) from Bacteroides ovatus ATCC 8483 at 1.70 A resolution."
JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG)
Submitted (NOV-2012) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS) OF 34-465 IN COMPLEX WITH CHLORIDE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AAXF02000029 Genomic DNA. Translation: EDO14069.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4HW6X-ray1.70A/B/C/D34-465[»]
ProteinModelPortalA7LR39.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEDO14069; EDO14069; BACOVA_00264.
PATRIC27041344. VBIBacOva42630_1761.

Family and domain databases

Gene3D2.120.10.30. 1 hit.
2.60.40.10. 1 hit.
InterProIPR011042. 6-blade_b-propeller_TolB-like.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002909. IPT.
[Graphical view]
PfamPF01833. TIG. 1 hit.
[Graphical view]
SMARTSM00429. IPT. 1 hit.
[Graphical view]
SUPFAMSSF81296. SSF81296. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA7LR39_BACO1
AccessionPrimary (citable) accession number: A7LR39
Entry history
Integrated into UniProtKB/TrEMBL: October 2, 2007
Last sequence update: October 2, 2007
Last modified: June 11, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)