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A7LPD8 (A7LPD8_CAEEL) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:hda-6 EMBL CCD71106.1 WormBase F41H10.6c
ORF Names:CELE_F41H10.6 EMBL CCD71106.1, F41H10.6 WormBase F41H10.6c
OrganismCaenorhabditis elegans [Reference proteome] EMBL CCD71106.1
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis

Protein attributes

Sequence length957 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A7LPD8 [UniParc].

Last modified September 11, 2007. Version 1.
Checksum: C2D025AFB4920FD2

FASTA957107,024
        10         20         30         40         50         60 
MLFEDRQKNR STGPTLIGFN QTQNEHENTV CPTHPESSDR ILKIKEALTK TKILEKCTVL 

        70         80         90        100        110        120 
TNFLEIDDAD LEVTHDKSMV KDLMESEKKT QEDINSQCEK YDSVFMTEFQ NSMKVAKDGV 

       130        140        150        160        170        180 
ACVRDLTNRI MANEASNGFA VVRPPGHHAD SVSPCGFCLF NNVAQAAEEA FFSGAERILI 

       190        200        210        220        230        240 
VDLDVHHGHG TQRIFYDDKR VLYFSIHRHE HGLFWPHLPE SDFDHIGSGK GLGYNANLAL 

       250        260        270        280        290        300 
NETGCTDSDY LSIIFHVLLP LATQFDPHFV IISAGFDALL GDPLGGMCLT PDGYSHILYH 

       310        320        330        340        350        360 
LKSLAQGRML VVLEGGYNHQ ISAVAVQRCV RVLLGYAPFS IELNEAPKES TVDSCVSLVS 

       370        380        390        400        410        420 
VLRHHWNCFD YFPSRTSLRL AQWPIVNTKV IYNYDPTTRR ADTGEIIQDE LASTEFTASD 

       430        440        450        460        470        480 
VIPTENMETL IYFNEGDDAH FDLEEDNHPE KPARTRRILK TLRESGVLEK CVDRNCERIA 

       490        500        510        520        530        540 
TNEEIRLVHT KKMLEHLRTT ETMKDEELME EAEKEFNSIY LTRDTLKVAR KAVGAVLQSV 

       550        560        570        580        590        600 
DEIFEKDAGQ RNALVIVRPP GHHASASKSS GFCIFNNVAV AAKYAQRRHK AKRVLILDWD 

       610        620        630        640        650        660 
VHHGNGTQEI FYEDSNVMYM SIHRHDKGNF YPIGEPKDYS DVGEGAGEGM SVNVPFSGVQ 

       670        680        690        700        710        720 
MGDNEYQMAF QRVIMPIAYQ FNPDLVLISA GFDAAVDDPL GEYKVTPETF ALMTYQLSSL 

       730        740        750        760        770        780 
AGGRIITVLE GGYNLTSISN SAQAVCEVLQ NRSMLRRLRE EKEQFATKPQ KIESSCIKTI 

       790        800        810        820        830        840 
REVCAVQQKY WSILKGFQVT PSNYGLDIDD EAYDDDSIDM ADQSSSSGSS SSSTRPSHNL 

       850        860        870        880        890        900 
EIMDSGPAHA VVPLATCPHL KEVKPLPPAK INARTACSEC QIGAEVWTCL TCYKYNCGRF 

       910        920        930        940        950 
VNEHAMMHHL SSSHPMALSM ADLSVWCYPC DSYVHNPALI GAKSAAHESK FGETMPS 

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References

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FO081367 Genomic DNA. Translation: CCD71106.1.
RefSeqNP_001122780.1. NM_001129308.2.
UniGeneCel.12964.

3D structure databases

ProteinModelPortalA7LPD8.
SMRA7LPD8. Positions 33-369, 444-795, 853-956.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaF41H10.6c; F41H10.6c; F41H10.6.
GeneID177316.
KEGGcel:CELE_F41H10.6.
UCSCF41H10.6c. c. elegans.

Organism-specific databases

CTD177316.
WormBaseF41H10.6c; CE41132; WBGene00018319; hda-6.

Phylogenomic databases

HOGENOMHOG000004769.
InParanoidA7LPD8.
KOK11407.
OMALQENWVC.
OrthoDBEOG7992PT.
PhylomeDBA7LPD8.

Family and domain databases

Gene3D3.30.40.10. 1 hit.
3.40.800.20. 2 hits.
InterProIPR000286. His_deacetylse.
IPR023801. His_deacetylse_dom.
IPR013083. Znf_RING/FYVE/PHD.
IPR001607. Znf_UBP.
[Graphical view]
PANTHERPTHR10625. PTHR10625. 1 hit.
PfamPF00850. Hist_deacetyl. 2 hits.
PF02148. zf-UBP. 1 hit.
[Graphical view]
PRINTSPR01270. HDASUPER.
PROSITEPS50271. ZF_UBP. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio896234.
PROA7LPD8.

Entry information

Entry nameA7LPD8_CAEEL
AccessionPrimary (citable) accession number: A7LPD8
Entry history
Integrated into UniProtKB/TrEMBL: September 11, 2007
Last sequence update: September 11, 2007
Last modified: April 16, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)