SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

A7LPD8

- A7LPD8_CAEEL

UniProt

A7LPD8 - A7LPD8_CAEEL

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

Protein HDA-6, isoform c

Gene
hda-6, CELE_F41H10.6, F41H10.6
Organism
Caenorhabditis elegans
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. protein deacetylase activity Source: WormBase
  2. zinc ion binding Source: InterPro

GO - Biological processi

  1. protein deacetylation Source: GOC
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseSAAS annotations

Names & Taxonomyi

Protein namesi
Submitted name:
Protein HDA-6, isoform cImported
Gene namesi
Name:hda-6Imported
ORF Names:CELE_F41H10.6Imported, F41H10.6Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
ProteomesiUP000001940: Chromosome IV

Organism-specific databases

WormBaseiF41H10.6c; CE41132; WBGene00018319; hda-6.

Structurei

3D structure databases

ProteinModelPortaliA7LPD8.
SMRiA7LPD8. Positions 33-395, 444-818, 853-956.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00530000062809.
HOGENOMiHOG000004769.
InParanoidiA7LPD8.
KOiK11407.
OMAiLQENWVC.
OrthoDBiEOG7992PT.
PhylomeDBiA7LPD8.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
3.40.800.20. 2 hits.
InterProiIPR000286. His_deacetylse.
IPR023801. His_deacetylse_dom.
IPR013083. Znf_RING/FYVE/PHD.
IPR001607. Znf_UBP.
[Graphical view]
PANTHERiPTHR10625. PTHR10625. 1 hit.
PfamiPF00850. Hist_deacetyl. 2 hits.
PF02148. zf-UBP. 1 hit.
[Graphical view]
PRINTSiPR01270. HDASUPER.
PROSITEiPS50271. ZF_UBP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A7LPD8-1 [UniParc]FASTAAdd to Basket

« Hide

MLFEDRQKNR STGPTLIGFN QTQNEHENTV CPTHPESSDR ILKIKEALTK    50
TKILEKCTVL TNFLEIDDAD LEVTHDKSMV KDLMESEKKT QEDINSQCEK 100
YDSVFMTEFQ NSMKVAKDGV ACVRDLTNRI MANEASNGFA VVRPPGHHAD 150
SVSPCGFCLF NNVAQAAEEA FFSGAERILI VDLDVHHGHG TQRIFYDDKR 200
VLYFSIHRHE HGLFWPHLPE SDFDHIGSGK GLGYNANLAL NETGCTDSDY 250
LSIIFHVLLP LATQFDPHFV IISAGFDALL GDPLGGMCLT PDGYSHILYH 300
LKSLAQGRML VVLEGGYNHQ ISAVAVQRCV RVLLGYAPFS IELNEAPKES 350
TVDSCVSLVS VLRHHWNCFD YFPSRTSLRL AQWPIVNTKV IYNYDPTTRR 400
ADTGEIIQDE LASTEFTASD VIPTENMETL IYFNEGDDAH FDLEEDNHPE 450
KPARTRRILK TLRESGVLEK CVDRNCERIA TNEEIRLVHT KKMLEHLRTT 500
ETMKDEELME EAEKEFNSIY LTRDTLKVAR KAVGAVLQSV DEIFEKDAGQ 550
RNALVIVRPP GHHASASKSS GFCIFNNVAV AAKYAQRRHK AKRVLILDWD 600
VHHGNGTQEI FYEDSNVMYM SIHRHDKGNF YPIGEPKDYS DVGEGAGEGM 650
SVNVPFSGVQ MGDNEYQMAF QRVIMPIAYQ FNPDLVLISA GFDAAVDDPL 700
GEYKVTPETF ALMTYQLSSL AGGRIITVLE GGYNLTSISN SAQAVCEVLQ 750
NRSMLRRLRE EKEQFATKPQ KIESSCIKTI REVCAVQQKY WSILKGFQVT 800
PSNYGLDIDD EAYDDDSIDM ADQSSSSGSS SSSTRPSHNL EIMDSGPAHA 850
VVPLATCPHL KEVKPLPPAK INARTACSEC QIGAEVWTCL TCYKYNCGRF 900
VNEHAMMHHL SSSHPMALSM ADLSVWCYPC DSYVHNPALI GAKSAAHESK 950
FGETMPS 957
Length:957
Mass (Da):107,024
Last modified:September 11, 2007 - v1
Checksum:iC2D025AFB4920FD2
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FO081367 Genomic DNA. Translation: CCD71106.1.
RefSeqiNP_001122780.1. NM_001129308.2.
UniGeneiCel.12964.

Genome annotation databases

EnsemblMetazoaiF41H10.6c; F41H10.6c; WBGene00018319.
GeneIDi177316.
KEGGicel:CELE_F41H10.6.
UCSCiF41H10.6c. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FO081367 Genomic DNA. Translation: CCD71106.1 .
RefSeqi NP_001122780.1. NM_001129308.2.
UniGenei Cel.12964.

3D structure databases

ProteinModelPortali A7LPD8.
SMRi A7LPD8. Positions 33-395, 444-818, 853-956.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai F41H10.6c ; F41H10.6c ; WBGene00018319 .
GeneIDi 177316.
KEGGi cel:CELE_F41H10.6.
UCSCi F41H10.6c. c. elegans.

Organism-specific databases

CTDi 177316.
WormBasei F41H10.6c ; CE41132 ; WBGene00018319 ; hda-6.

Phylogenomic databases

GeneTreei ENSGT00530000062809.
HOGENOMi HOG000004769.
InParanoidi A7LPD8.
KOi K11407.
OMAi LQENWVC.
OrthoDBi EOG7992PT.
PhylomeDBi A7LPD8.

Miscellaneous databases

NextBioi 896234.
PROi A7LPD8.

Family and domain databases

Gene3Di 3.30.40.10. 1 hit.
3.40.800.20. 2 hits.
InterProi IPR000286. His_deacetylse.
IPR023801. His_deacetylse_dom.
IPR013083. Znf_RING/FYVE/PHD.
IPR001607. Znf_UBP.
[Graphical view ]
PANTHERi PTHR10625. PTHR10625. 1 hit.
Pfami PF00850. Hist_deacetyl. 2 hits.
PF02148. zf-UBP. 1 hit.
[Graphical view ]
PRINTSi PR01270. HDASUPER.
PROSITEi PS50271. ZF_UBP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    The C. elegans sequencing consortium
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2.

Entry informationi

Entry nameiA7LPD8_CAEEL
AccessioniPrimary (citable) accession number: A7LPD8
Entry historyi
Integrated into UniProtKB/TrEMBL: September 11, 2007
Last sequence update: September 11, 2007
Last modified: July 9, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

Similar proteinsi