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Protein
Submitted name:

Transient receptor potential cation channel subfamily M member 5

Gene

Trpm5

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionReceptorImported

Names & Taxonomyi

Protein namesi
Submitted name:
Transient receptor potential cation channel subfamily M member 5Imported
Gene namesi
Name:Trpm5Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei30 – 52HelicalSequence analysisAdd BLAST23

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiA7L640.

Expressioni

Gene expression databases

BgeeiENSRNOG00000020484.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3614. Eukaryota.
ENOG410XR5B. LUCA.
HOGENOMiHOG000236350.

Family and domain databases

InterProiView protein in InterPro
IPR029577. TRPM5.
PANTHERiPTHR13800:SF18. PTHR13800:SF18. 1 hit.

Sequencei

Sequence statusi: Fragment.

A7L640-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
VFTLRLIHIF AIHKQLGPKI IIVERMMKDV FFFLFFLSVW LVAYGVTTQA
60 70 80 90 100
LLHPHDGRLE WIFRRVLYRP YLQIFGQIPL DEIDEARVNC SLHPLLLDSS
110
ASCPNLYANW
Length:110
Mass (Da):12,957
Last modified:September 11, 2007 - v1
Checksum:i824E6E439934DC58
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei110Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EF673692 mRNA. Translation: ABS12240.1.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiA7L640_RAT
AccessioniPrimary (citable) accession number: A7L640
Entry historyiIntegrated into UniProtKB/TrEMBL: September 11, 2007
Last sequence update: September 11, 2007
Last modified: July 5, 2017
This is version 42 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)