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A7K5X5

- A7K5X5_VIBSE

UniProt

A7K5X5 - A7K5X5_VIBSE

Protein

Glycine--tRNA ligase beta subunit

Gene

glyS

Organism
Vibrio sp. (strain Ex25)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 52 (01 Oct 2014)
      Sequence version 1 (11 Sep 2007)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly).UniRule annotationSAAS annotation

    GO - Molecular functioni

    1. arginine-tRNA ligase activity Source: InterPro
    2. ATP binding Source: UniProtKB-KW
    3. glycine-tRNA ligase activity Source: UniProtKB-EC

    GO - Biological processi

    1. arginyl-tRNA aminoacylation Source: InterPro
    2. glycyl-tRNA aminoacylation Source: InterPro

    Keywords - Molecular functioni

    Aminoacyl-tRNA synthetaseUniRule annotationSAAS annotationImported, Ligase

    Keywords - Biological processi

    Protein biosynthesisUniRule annotationSAAS annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotationSAAS annotation, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciVSP150340:GJJG-403-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glycine--tRNA ligase beta subunitUniRule annotation (EC:6.1.1.14UniRule annotation)
    Alternative name(s):
    Glycyl-tRNA synthetase beta subunitUniRule annotation
    Gene namesi
    Name:glySUniRule annotationImported
    Ordered Locus Names:VEA_002000Imported
    ORF Names:VEx25_0007Imported
    OrganismiVibrio sp. (strain Ex25)Imported
    Taxonomic identifieri150340 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000002571: Chromosome 1

    Subcellular locationi

    Cytoplasm UniRule annotationSAAS annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotationSAAS annotation

    Interactioni

    Subunit structurei

    Tetramer of two alpha and two beta subunits.UniRule annotationSAAS annotation

    Protein-protein interaction databases

    STRINGi150340.VEA_002000.

    Structurei

    3D structure databases

    ProteinModelPortaliA7K5X5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the class-II aminoacyl-tRNA synthetase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0751.
    HOGENOMiHOG000264302.
    KOiK01879.
    OMAiLPIPKRM.
    OrthoDBiEOG661H9S.

    Family and domain databases

    Gene3Di1.10.730.10. 1 hit.
    HAMAPiMF_00255. Gly_tRNA_synth_beta.
    InterProiIPR008909. DALR_anticod-bd.
    IPR015944. Gly-tRNA-synth_bsu.
    IPR006194. Gly-tRNA-synth_heterodimer.
    IPR009080. tRNAsynth_1a_anticodon-bd.
    [Graphical view]
    PfamiPF05746. DALR_1. 1 hit.
    PF02092. tRNA_synt_2f. 1 hit.
    [Graphical view]
    PRINTSiPR01045. TRNASYNTHGB.
    SMARTiSM00836. DALR_1. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR00211. glyS. 1 hit.
    PROSITEiPS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A7K5X5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAKEFLIELG TEELPPTQLR TLAEAFAANF EAELKSAELA HEGVKWFAAP    50
    RRLALKVAAL AESQSDKIVE KRGPAVSAAF DAEGNPTKAA QGWARGCGIS 100
    VDQAERMVTD KGEWLLFKQE VKGQPTSEIV VELAAKALAN LPIAKPMRWG 150
    NKTTQFIRPV KTLTMLMGSD LIEGEILGVA SDRTIRGHRF MGEQEFTIDS 200
    AEQYPAILEE RGKVMADYEA RKAIILADAQ KAAAAVGGIA DLEDDLVEEV 250
    TSLVEWPVVL TAKFEEEFLK VPSEALVYTM KGDQKYFPVY DENKKLLPNF 300
    IFVSNIESKE PRYVIEGNEK VVRPRLADAE FFFNTDRKRP LIDRLPELEQ 350
    AIFQKQLGTI KDKTDRITEL AGYIAEQIGA DVEKSKRAGL LAKCDLMTSM 400
    VFEFTDTQGV MGMHYARHDG EAEEVAVALN EQYMPRFAGD ELPSNGVSTA 450
    VAMADKLDTI VGIFGIGQAP KGSDPFALRR ASLGVLRIIV EYGYNLDLVD 500
    LVAKAKSLFV DRLTNDNVEQ DVIEFMLGRF RAWYQDEGFS VDIIQAVLAR 550
    RPTKPADFDQ RVKAVSHFRE LEAAESLAAA NKRVGNILAK FDGELAADID 600
    LALLQEDAEK ALAESVEVMT EALEPAFATG NYQEALSKLA DLREPVDAFF 650
    DNVMVMADDE ALKKNRLTLL NNLRNLFLQV ADISVLQK 688
    Length:688
    Mass (Da):76,213
    Last modified:September 11, 2007 - v1
    Checksum:i2B0FC1B2B5314413
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001805 Genomic DNA. Translation: ACY50163.1.
    DS267854 Genomic DNA. Translation: EDN56007.1.
    RefSeqiWP_006743180.1. NZ_DS267854.1.
    YP_003284628.1. NC_013456.1.

    Genome annotation databases

    EnsemblBacteriaiACY50163; ACY50163; VEA_002000.
    EDN56007; EDN56007; VEx25_0007.
    GeneIDi8555640.
    KEGGivex:VEA_002000.
    PATRICi28405270. VBIVibSp2903_3997.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001805 Genomic DNA. Translation: ACY50163.1 .
    DS267854 Genomic DNA. Translation: EDN56007.1 .
    RefSeqi WP_006743180.1. NZ_DS267854.1.
    YP_003284628.1. NC_013456.1.

    3D structure databases

    ProteinModelPortali A7K5X5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 150340.VEA_002000.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACY50163 ; ACY50163 ; VEA_002000 .
    EDN56007 ; EDN56007 ; VEx25_0007 .
    GeneIDi 8555640.
    KEGGi vex:VEA_002000.
    PATRICi 28405270. VBIVibSp2903_3997.

    Phylogenomic databases

    eggNOGi COG0751.
    HOGENOMi HOG000264302.
    KOi K01879.
    OMAi LPIPKRM.
    OrthoDBi EOG661H9S.

    Enzyme and pathway databases

    BioCyci VSP150340:GJJG-403-MONOMER.

    Family and domain databases

    Gene3Di 1.10.730.10. 1 hit.
    HAMAPi MF_00255. Gly_tRNA_synth_beta.
    InterProi IPR008909. DALR_anticod-bd.
    IPR015944. Gly-tRNA-synth_bsu.
    IPR006194. Gly-tRNA-synth_heterodimer.
    IPR009080. tRNAsynth_1a_anticodon-bd.
    [Graphical view ]
    Pfami PF05746. DALR_1. 1 hit.
    PF02092. tRNA_synt_2f. 1 hit.
    [Graphical view ]
    PRINTSi PR01045. TRNASYNTHGB.
    SMARTi SM00836. DALR_1. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR00211. glyS. 1 hit.
    PROSITEi PS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Heidelberg J., Sebastian Y.
      Submitted (NOV-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: Ex25Imported.
    2. "Sequence of the deep-sea isolate Vibrio sp. strain Ex25."
      Munk A.C., Tapia R., Green L., Rogers Y., Detter J.C., Bruce D., Brettin T.S., Colwell R., Huq A., Grim C.J., Hasan N.A., Vonstein V., Bartels D.
      Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Ex25Imported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: EX25Imported.

    Entry informationi

    Entry nameiA7K5X5_VIBSE
    AccessioniPrimary (citable) accession number: A7K5X5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 11, 2007
    Last sequence update: September 11, 2007
    Last modified: October 1, 2014
    This is version 52 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3