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A7K5X5

- A7K5X5_VIBSE

UniProt

A7K5X5 - A7K5X5_VIBSE

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Protein
Glycine--tRNA ligase beta subunit
Gene
glyS, VEA_002000, VEx25_0007
Organism
Vibrio sp. (strain Ex25)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly).UniRule annotationSAAS annotations

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. arginine-tRNA ligase activity Source: InterPro
  3. glycine-tRNA ligase activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. arginyl-tRNA aminoacylation Source: InterPro
  2. glycyl-tRNA aminoacylation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Aminoacyl-tRNA synthetaseUniRule annotationSAAS annotationsImported, Ligase

Keywords - Biological processi

Protein biosynthesisUniRule annotationSAAS annotations

Keywords - Ligandi

ATP-bindingUniRule annotationSAAS annotations, Nucleotide-binding

Enzyme and pathway databases

BioCyciVSP150340:GJJG-403-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycine--tRNA ligase beta subunitUniRule annotation (EC:6.1.1.14UniRule annotation)
Alternative name(s):
Glycyl-tRNA synthetase beta subunit
Gene namesi
Name:glySUniRule annotationImported
Ordered Locus Names:VEA_002000Imported
ORF Names:VEx25_0007Imported
OrganismiVibrio sp. (strain Ex25)Imported
Taxonomic identifieri150340 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000002571: Chromosome 1

Subcellular locationi

Cytoplasm By similarity UniRule annotationSAAS annotations

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotations

Interactioni

Subunit structurei

Tetramer of two alpha and two beta subunits By similarity.UniRule annotationSAAS annotations

Protein-protein interaction databases

STRINGi150340.VEA_002000.

Structurei

3D structure databases

ProteinModelPortaliA7K5X5.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0751.
HOGENOMiHOG000264302.
KOiK01879.
OMAiLPIPKRM.
OrthoDBiEOG661H9S.

Family and domain databases

Gene3Di1.10.730.10. 1 hit.
HAMAPiMF_00255. Gly_tRNA_synth_beta.
InterProiIPR008909. DALR_anticod-bd.
IPR015944. Gly-tRNA-synth_bsu.
IPR006194. Gly-tRNA-synth_heterodimer.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view]
PfamiPF05746. DALR_1. 1 hit.
PF02092. tRNA_synt_2f. 1 hit.
[Graphical view]
PRINTSiPR01045. TRNASYNTHGB.
SMARTiSM00836. DALR_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00211. glyS. 1 hit.
PROSITEiPS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A7K5X5-1 [UniParc]FASTAAdd to Basket

« Hide

MAKEFLIELG TEELPPTQLR TLAEAFAANF EAELKSAELA HEGVKWFAAP    50
RRLALKVAAL AESQSDKIVE KRGPAVSAAF DAEGNPTKAA QGWARGCGIS 100
VDQAERMVTD KGEWLLFKQE VKGQPTSEIV VELAAKALAN LPIAKPMRWG 150
NKTTQFIRPV KTLTMLMGSD LIEGEILGVA SDRTIRGHRF MGEQEFTIDS 200
AEQYPAILEE RGKVMADYEA RKAIILADAQ KAAAAVGGIA DLEDDLVEEV 250
TSLVEWPVVL TAKFEEEFLK VPSEALVYTM KGDQKYFPVY DENKKLLPNF 300
IFVSNIESKE PRYVIEGNEK VVRPRLADAE FFFNTDRKRP LIDRLPELEQ 350
AIFQKQLGTI KDKTDRITEL AGYIAEQIGA DVEKSKRAGL LAKCDLMTSM 400
VFEFTDTQGV MGMHYARHDG EAEEVAVALN EQYMPRFAGD ELPSNGVSTA 450
VAMADKLDTI VGIFGIGQAP KGSDPFALRR ASLGVLRIIV EYGYNLDLVD 500
LVAKAKSLFV DRLTNDNVEQ DVIEFMLGRF RAWYQDEGFS VDIIQAVLAR 550
RPTKPADFDQ RVKAVSHFRE LEAAESLAAA NKRVGNILAK FDGELAADID 600
LALLQEDAEK ALAESVEVMT EALEPAFATG NYQEALSKLA DLREPVDAFF 650
DNVMVMADDE ALKKNRLTLL NNLRNLFLQV ADISVLQK 688
Length:688
Mass (Da):76,213
Last modified:September 11, 2007 - v1
Checksum:i2B0FC1B2B5314413
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001805 Genomic DNA. Translation: ACY50163.1.
DS267854 Genomic DNA. Translation: EDN56007.1.
RefSeqiWP_006743180.1. NZ_DS267854.1.
YP_003284628.1. NC_013456.1.

Genome annotation databases

EnsemblBacteriaiACY50163; ACY50163; VEA_002000.
EDN56007; EDN56007; VEx25_0007.
GeneIDi8555640.
KEGGivex:VEA_002000.
PATRICi28405270. VBIVibSp2903_3997.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001805 Genomic DNA. Translation: ACY50163.1 .
DS267854 Genomic DNA. Translation: EDN56007.1 .
RefSeqi WP_006743180.1. NZ_DS267854.1.
YP_003284628.1. NC_013456.1.

3D structure databases

ProteinModelPortali A7K5X5.
ModBasei Search...

Protein-protein interaction databases

STRINGi 150340.VEA_002000.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACY50163 ; ACY50163 ; VEA_002000 .
EDN56007 ; EDN56007 ; VEx25_0007 .
GeneIDi 8555640.
KEGGi vex:VEA_002000.
PATRICi 28405270. VBIVibSp2903_3997.

Phylogenomic databases

eggNOGi COG0751.
HOGENOMi HOG000264302.
KOi K01879.
OMAi LPIPKRM.
OrthoDBi EOG661H9S.

Enzyme and pathway databases

BioCyci VSP150340:GJJG-403-MONOMER.

Family and domain databases

Gene3Di 1.10.730.10. 1 hit.
HAMAPi MF_00255. Gly_tRNA_synth_beta.
InterProi IPR008909. DALR_anticod-bd.
IPR015944. Gly-tRNA-synth_bsu.
IPR006194. Gly-tRNA-synth_heterodimer.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view ]
Pfami PF05746. DALR_1. 1 hit.
PF02092. tRNA_synt_2f. 1 hit.
[Graphical view ]
PRINTSi PR01045. TRNASYNTHGB.
SMARTi SM00836. DALR_1. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR00211. glyS. 1 hit.
PROSITEi PS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Heidelberg J., Sebastian Y.
    Submitted (NOV-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Ex25Imported.
  2. "Sequence of the deep-sea isolate Vibrio sp. strain Ex25."
    Munk A.C., Tapia R., Green L., Rogers Y., Detter J.C., Bruce D., Brettin T.S., Colwell R., Huq A., Grim C.J., Hasan N.A., Vonstein V., Bartels D.
    Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Ex25.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: EX25Imported.

Entry informationi

Entry nameiA7K5X5_VIBSE
AccessioniPrimary (citable) accession number: A7K5X5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 11, 2007
Last sequence update: September 11, 2007
Last modified: September 3, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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