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Protein
Submitted name:

Glutamate decarboxylase eukaryotic type

Gene

VEA_003759

Organism
Vibrio sp. (strain Ex25)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciVSP150340:GJJG-2257-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glutamate decarboxylase eukaryotic typeImported (EC:4.1.1.15Imported)
Submitted name:
Pyridoxal-dependent decarboxylase conserved domain, putativeImported
Gene namesi
Ordered Locus Names:VEA_003759Imported
ORF Names:VEx25_0825Imported
OrganismiVibrio sp. (strain Ex25)Imported
Taxonomic identifieri150340 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000002571 Componenti: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi150340.VEA_003759.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiALGAFCS.
OrthoDBiEOG6MSRZP.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

A7K3V7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVKEQKTADV SFESLLKIFT VPEGPDSTLT KIDESLSRNL NQFLREHIVA
60 70 80 90 100
EEKPLREIEK DFSSAQIPEQ PEFVSDHTEH LLDTLVSHSV HTSSPSFIGH
110 120 130 140 150
MTSALPYFLM PLSKIMIALN QNLVKIETSK AFTPLERQVL GMLHRLIYGQ
160 170 180 190 200
SDTFYDQWMH SANHSLGAFC SGGTIANITA LWVARNKALR ANGSFKGVEK
210 220 230 240 250
EGLFKAMKHY GYDGLAVLVS ERGHYSLKKA ADVLGLGQEG LVAVKTDANN
260 270 280 290 300
RIIVDDLKAK IVELEKQNIK PIAVIGVAGT TETGNVDPLP EIAEVCQAHG
310 320 330 340 350
CHFHVDAAWG GATLMSNHHR HLLNGVEMAD SVTIDAHKQL YIPMGAGMVL
360 370 380 390 400
FKDPDAMKSI EHHAQYILRK GSKDLGSHTL EGSRSGMAML VYAAMHIISR
410 420 430 440 450
PGYELLIDQS IEKARYFADL IKQQDDFELV SEPELCLLTY RYLPPFIREA
460 470 480 490 500
LAKAEGSQKE QLNELINELT QFIQKRQRET GKSFVSRTRL NPDQWQRMNT
510 520 530 540
IVFRVVLANP LTTKEILSSV LDEQREIAKQ APNLMERIQQ VVTDIQSS
Length:548
Mass (Da):61,320
Last modified:September 11, 2007 - v1
Checksum:i744FCD2690CC4A39
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001805 Genomic DNA. Translation: ACY51919.1.
DS267828 Genomic DNA. Translation: EDN56728.1.
RefSeqiWP_006742621.1. NZ_DS267828.1.
YP_003286384.1. NC_013456.1.

Genome annotation databases

EnsemblBacteriaiACY51919; ACY51919; VEA_003759.
EDN56728; EDN56728; VEx25_0825.
KEGGivex:VEA_003759.
PATRICi28403132. VBIVibSp2903_2976.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001805 Genomic DNA. Translation: ACY51919.1.
DS267828 Genomic DNA. Translation: EDN56728.1.
RefSeqiWP_006742621.1. NZ_DS267828.1.
YP_003286384.1. NC_013456.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi150340.VEA_003759.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACY51919; ACY51919; VEA_003759.
EDN56728; EDN56728; VEx25_0825.
KEGGivex:VEA_003759.
PATRICi28403132. VBIVibSp2903_2976.

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiALGAFCS.
OrthoDBiEOG6MSRZP.

Enzyme and pathway databases

BioCyciVSP150340:GJJG-2257-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Heidelberg J., Sebastian Y.
    Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Ex25Imported.
  2. "Sequence of the deep-sea isolate Vibrio sp. strain Ex25."
    Munk A.C., Tapia R., Green L., Rogers Y., Detter J.C., Bruce D., Brettin T.S., Colwell R., Huq A., Grim C.J., Hasan N.A., Vonstein V., Bartels D.
    Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Ex25Imported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: EX25Imported.

Entry informationi

Entry nameiA7K3V7_VIBSE
AccessioniPrimary (citable) accession number: A7K3V7
Entry historyi
Integrated into UniProtKB/TrEMBL: September 11, 2007
Last sequence update: September 11, 2007
Last modified: April 1, 2015
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.