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A7K3V7 (A7K3V7_VIBSE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL ACY51919.1

Pyridoxal-dependent decarboxylase conserved domain, putative EMBL EDN56728.1
Gene names
Ordered Locus Names:VEA_003759 EMBL ACY51919.1
ORF Names:VEx25_0825 EMBL EDN56728.1
OrganismVibrio sp. (strain Ex25) [Complete proteome] [HAMAP] EMBL EDN56728.1
Taxonomic identifier150340 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length548 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
A7K3V7 [UniParc].

Last modified September 11, 2007. Version 1.
Checksum: 744FCD2690CC4A39

FASTA54861,320
        10         20         30         40         50         60 
MVKEQKTADV SFESLLKIFT VPEGPDSTLT KIDESLSRNL NQFLREHIVA EEKPLREIEK 

        70         80         90        100        110        120 
DFSSAQIPEQ PEFVSDHTEH LLDTLVSHSV HTSSPSFIGH MTSALPYFLM PLSKIMIALN 

       130        140        150        160        170        180 
QNLVKIETSK AFTPLERQVL GMLHRLIYGQ SDTFYDQWMH SANHSLGAFC SGGTIANITA 

       190        200        210        220        230        240 
LWVARNKALR ANGSFKGVEK EGLFKAMKHY GYDGLAVLVS ERGHYSLKKA ADVLGLGQEG 

       250        260        270        280        290        300 
LVAVKTDANN RIIVDDLKAK IVELEKQNIK PIAVIGVAGT TETGNVDPLP EIAEVCQAHG 

       310        320        330        340        350        360 
CHFHVDAAWG GATLMSNHHR HLLNGVEMAD SVTIDAHKQL YIPMGAGMVL FKDPDAMKSI 

       370        380        390        400        410        420 
EHHAQYILRK GSKDLGSHTL EGSRSGMAML VYAAMHIISR PGYELLIDQS IEKARYFADL 

       430        440        450        460        470        480 
IKQQDDFELV SEPELCLLTY RYLPPFIREA LAKAEGSQKE QLNELINELT QFIQKRQRET 

       490        500        510        520        530        540 
GKSFVSRTRL NPDQWQRMNT IVFRVVLANP LTTKEILSSV LDEQREIAKQ APNLMERIQQ 


VVTDIQSS 

« Hide

References

« Hide 'large scale' references
[1]Heidelberg J., Sebastian Y.
Submitted (NOV-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Ex25 EMBL EDN56728.1.
[2]"Sequence of the deep-sea isolate Vibrio sp. strain Ex25."
Munk A.C., Tapia R., Green L., Rogers Y., Detter J.C., Bruce D., Brettin T.S., Colwell R., Huq A., Grim C.J., Hasan N.A., Vonstein V., Bartels D.
Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Ex25.
[3]Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)
Munk A.C., Tapia R., Green L., Rogers Y., Detter J.C., Bruce D., Brettin T.S., Colwell R., Huq A., Grim C.J., Hasan N.A., Vonstein V., Bartels D.
Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: EX25 EMBL ACY51919.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001805 Genomic DNA. Translation: ACY51919.1.
DS267828 Genomic DNA. Translation: EDN56728.1.
RefSeqYP_003286384.1. NC_013456.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING150340.VEA_003759.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACY51919; ACY51919; VEA_003759.
EDN56728; EDN56728; VEx25_0825.
GeneID8557494.
KEGGvex:VEA_003759.
PATRIC28403132. VBIVibSp2903_2976.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000282553.
KOK01580.
OMAALGAFCS.
OrthoDBEOG6MSRZP.
ProtClustDBCLSK874231.

Enzyme and pathway databases

BioCycVSP150340:GJJG-2257-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA7K3V7_VIBSE
AccessionPrimary (citable) accession number: A7K3V7
Entry history
Integrated into UniProtKB/TrEMBL: September 11, 2007
Last sequence update: September 11, 2007
Last modified: April 16, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)