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A7IPN0 (A7IPN0_XANP2) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
DNA topoisomerase IV, B subunit EMBL ABS69976.1
EC=5.99.1.3 EMBL ABS69976.1
Gene names
Ordered Locus Names:Xaut_4757
OrganismXanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) [Complete proteome] [HAMAP]
Taxonomic identifier78245 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Xanthobacteraceae › Xanthobacter

Protein attributes

Sequence length678 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the type II topoisomerase family. RuleBase RU000380

Sequences

Sequence LengthMass (Da)Tools
A7IPN0 [UniParc].

Last modified September 11, 2007. Version 1.
Checksum: F58F1B0050BE0435

FASTA67874,003
        10         20         30         40         50         60 
MSQSDDLFGS TPRPKPAGKP AKAAAAAVPA MDADYTAAHI EVLEGLEPVR RRPGMYIGGT 

        70         80         90        100        110        120 
DSKALHHLFA EVIDNCMDEA VAGHATFIEV QMAADGYLTV SDNGRGIPVE EHPKFPGKSA 

       130        140        150        160        170        180 
LEVIMTTLHA GGKFDSKVYE TSGGLHGVGI SVVNALSDDL EVEVTRNQTL YRQSFSKGVP 

       190        200        210        220        230        240 
QGKLKEVGRI TNRRGTRVRF HPDPEIFGPS ARFEPARVFR MARSKAYLFG GVEIRWSCDP 

       250        260        270        280        290        300 
ELLKGIEGVP EKTSFRFPGG LRDYLAADLE GQTLVHSDIF SGRIQKPGGH GSVEWAVAWV 

       310        320        330        340        350        360 
ADADGSISSY CNTIPTPDGG THENGLRAVL LKGLKDHAER SGQGKRGSVI TGDDVTTGCA 

       370        380        390        400        410        420 
AMLSVFVREP EFQGQTKDRL ATAEAARIVE QGLRDPFDHW LAANPVQASR LLEHVIDRAE 

       430        440        450        460        470        480 
ERLRRKQEKE VSRKTAVRKL RLPGKLADCS NTEAAGSEIF IVEGDSAGGS AKQARDRKTQ 

       490        500        510        520        530        540 
AVLPLRGKIL NVASATRDKL AQNQQLADLG QALGCGMLSH YRDADLRYEK VIIMTDADVD 

       550        560        570        580        590        600 
GAHIASLLVT FFFRQMPKLI EDGHLFLAVP PLYRITQGAK TLYARDDAHK EKLLKKEFTG 

       610        620        630        640        650        660 
KGKVEVGRFK GLGEMMPAQL KETTMDPRTR TLQRVTIEDA EQAATTDLVE RLMGNRPEAR 

       670 
FAFISERAAF AGEALLDI

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References

[1]"Complete sequence of chromosome of Xanthobacter autotrophicus Py2."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Brainard J., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Ensigns S.A., Richardson P.
Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-1158 / Py2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000781 Genomic DNA. Translation: ABS69976.1.
RefSeqYP_001419633.1. NC_009720.1.

3D structure databases

ProteinModelPortalA7IPN0.
ModBaseSearch...

Protein-protein interaction databases

STRINGA7IPN0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5421040.
GenomeReviewsGene locus Xaut_4757 in contig CP000781_GR.
KEGGxau:Xaut_4757.
PATRIC24051734. VBIXanAut29526_5120.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0187.
HOGENOMHBG304889.
OMAQARDKEF.
ProtClustDBPRK05559.

Enzyme and pathway databases

BioCycXAUT78245:XAUT_4757-MONOMER.

Family and domain databases

InterProIPR003594. ATPase-like_ATP-bd.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR001241. Topo_IIA.
IPR013759. Topo_IIA_B/N_ab.
IPR002288. Topo_IIA_B_C.
IPR013506. Topo_IIA_bsu_dom2.
IPR013760. Topo_IIA_cen.
IPR018522. TopoIIA_CS.
IPR005737. TopoIV_B_Gneg.
IPR006171. Toprim_domain.
[Graphical view]
Gene3DG3DSA:3.30.565.10. ATP_bd_ATPase. 1 hit.
G3DSA:3.30.230.10. Ribosomal_S5_D2-type_fold. 1 hit.
G3DSA:3.40.50.670. Topo_IIA_B/N_ab. 1 hit.
KOK02622.
PfamPF00204. DNA_gyraseB. 1 hit.
PF00986. DNA_gyraseB_C. 1 hit.
PF02518. HATPase_c. 1 hit.
PF01751. Toprim. 1 hit.
[Graphical view]
PRINTSPR00418. TPI2FAMILY.
SMARTSM00387. HATPase_c. 1 hit.
SM00433. TOP2c. 1 hit.
[Graphical view]
SUPFAMSSF55874. ATP_bd_ATPase. 1 hit.
SSF54211. Ribosomal_S5_D2-typ_fold. 1 hit.
SSF56719. Topo_IIA_cen. 1 hit.
TIGRFAMsTIGR01055. ParE_Gneg. 1 hit.
PROSITEPS00177. TOPOISOMERASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA7IPN0_XANP2
AccessionPrimary (citable) accession number: A7IPN0
Entry history
Integrated into UniProtKB/TrEMBL: September 11, 2007
Last sequence update: September 11, 2007
Last modified: January 25, 2012
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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