A7IMY3 (URED_XANP2) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Urease accessory protein UreD

Gene names

Name:	ureD
Ordered Locus Names:	Xaut_4154

Organism

Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) [Complete proteome] [HAMAP]

Taxonomic identifier

78245 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Xanthobacteraceae › Xanthobacter

Protein attributes

Sequence length	289 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Required for maturation of urease via the functional incorporation of the urease nickel metallocenter By similarity. HAMAP MF_01384
Subunit structure	UreD, UreF and UreG form a complex that acts as a GTP-hydrolysis-dependent molecular chaperone, activating the urease apoprotein by helping to assemble the nickel containing metallocenter of UreC. The UreE protein probably delivers the nickel By similarity.
Subcellular location	Cytoplasm By similarity HAMAP MF_01384.
Sequence similarities	Belongs to the UreD family.

Ontologies

Keywords
Cellular component	Cytoplasm
Ligand	Nickel
Molecular function	Chaperone
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	nitrogen compound metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	nickel cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 289	289	Urease accessory protein UreD HAMAP MF_01384		PRO_0000346613

Sequences

	Sequence		Length	Mass (Da)
	A7IMY3 [UniParc]. Last modified September 11, 2007. Version 1. Checksum: 68FC942ACACCFE96	FASTA	289	30,774
	10 20 30 40 50 60 MTTSAASWRS DPADPSVASA RERALRQRSE GRVRITASAF GGVTRLTDLA EGGALRARLP 70 80 90 100 110 120 RGGPGLEAVI VNTAGGVACG DVFSIEAKAG PGAHLTVATP AAEKVYRSDG LCADIQVRLV 130 140 150 160 170 180 AEAGARLDWL PQETILFDRA RLRRRYEIDL SATASFLSFE ALMLGRLAHG DAMGEGHLED 190 200 210 220 230 240 HWRLRRDGAL IFADALRLAG PMGALLARPA VAGGNRALAT LLYVAPDAEA RLEEARALLD 250 260 270 280 AARCEAGASA WNGLLCVRLL APDIETLRRD ATSFLMAFRN APLPRVWAT

References

[1]

"Complete sequence of chromosome of Xanthobacter autotrophicus Py2." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Brainard J., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Ensigns S.A., Richardson P. Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-1158 / Py2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000781 Genomic DNA. Translation: ABS69376.1.
RefSeq	YP_001419033.1. NC_009720.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A7IMY3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5425448.
GenomeReviews	Gene locus Xaut_4154 in contig CP000781_GR.
KEGG	xau:Xaut_4154.
PATRIC	24050472. VBIXanAut29526_4499.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0829.
HOGENOM	HBG711156.
OMA	QETILFD.
ProtClustDB	CLSK980186.
Enzyme and pathway databases
BioCyc	XAUT78245:XAUT_4154-MONOMER.
Family and domain databases
HAMAP	MF_01384. UreD. [Tree]
InterPro	IPR002669. UreD. [Graphical view]
KO	K03190.
Pfam	PF01774. UreD. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

URED_XANP2

Accession

Primary (citable) accession number: A7IMY3

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 2, 2008
Last sequence update:	September 11, 2007
Last modified:	January 25, 2012
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program