A7IK05 (RS6_XANP2) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
30S ribosomal protein S6

Gene names

Name:	rpsF
Ordered Locus Names:	Xaut_3118

Organism

Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) [Complete proteome] [HAMAP]

Taxonomic identifier

78245 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Xanthobacteraceae › Xanthobacter

Protein attributes

Sequence length	152 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds together with S18 to 16S ribosomal RNA By similarity. HAMAP MF_00360
Sequence similarities	Belongs to the ribosomal protein S6P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 152	152	30S ribosomal protein S6 HAMAP MF_00360		PRO_1000120824

Sequences

	Sequence		Length	Mass (Da)
	A7IK05 [UniParc]. Last modified September 11, 2007. Version 1. Checksum: 04D7C8FD349ECC72	FASTA	152	17,437
	10 20 30 40 50 60 MPLYEHVFLA RQDVTAQQVE ELTTRFKGVI EANGGSVGKT EYWGVKSLTY RINKNRKAHF 70 80 90 100 110 120 TLLNINAPAA AIQELERQQR IDEDVLRILT LRVEEHEEGP SAMLQKRDRD DRGERGDRGD 130 140 150 RGDRGDRGFG GREDRPRRPR PTEESHGGEE EV

References

[1]

"Complete sequence of chromosome of Xanthobacter autotrophicus Py2." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Brainard J., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Ensigns S.A., Richardson P. Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-1158 / Py2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000781 Genomic DNA. Translation: ABS68348.1.
RefSeq	YP_001418005.1. NC_009720.1.
3D structure databases
ProteinModelPortal	A7IK05.
ModBase	Search...
Protein-protein interaction databases
STRING	A7IK05.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5424945.
GenomeReviews	Gene locus Xaut_3118 in contig CP000781_GR.
KEGG	xau:Xaut_3118.
PATRIC	24048321. VBIXanAut29526_3443.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0360.
HOGENOM	HBG747554.
OMA	ITEASPM.
ProtClustDB	PRK00453.
Enzyme and pathway databases
BioCyc	XAUT78245:XAUT_3118-MONOMER.
Family and domain databases
HAMAP	MF_00360. Ribosomal_S6. [Tree]
InterPro	IPR000529. Ribosomal_S6. IPR020814. Ribosomal_S6_plastid/chlpt. IPR014717. Transl_elong_EF1B/ribosomal_S6. [Graphical view]
Gene3D	G3DSA:3.30.70.60. Transl_elong_EF1B/rib_con. 1 hit.
KO	K02990.
Pfam	PF01250. Ribosomal_S6. 1 hit. [Graphical view]
SUPFAM	SSF54995. Ribosomal_S6. 1 hit.
TIGRFAMs	TIGR00166. S6. 1 hit.
PROSITE	PS01048. RIBOSOMAL_S6. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RS6_XANP2

Accession

Primary (citable) accession number: A7IK05

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 14, 2009
Last sequence update:	September 11, 2007
Last modified:	January 25, 2012
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program