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A7IFC5

- A7IFC5_XANP2

UniProt

A7IFC5 - A7IFC5_XANP2

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Protein
Submitted name: ATP dependent DNA ligase
Gene
Xaut_1470
Organism
Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciXAUT78245:GHS6-1484-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Xaut_1470Imported
OrganismiXanthobacter autotrophicus (strain ATCC BAA-1158 / Py2)Imported
Taxonomic identifieri78245 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesXanthobacteraceaeXanthobacter
ProteomesiUP000002417: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi78245.Xaut_1470.

Structurei

3D structure databases

ProteinModelPortaliA7IFC5.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiRVWLWSR.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A7IFC5-1 [UniParc]FASTAAdd to Basket

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MNRFAALLDR MSYEAGRNAK IRLMADYFRT TPDPERGFAL AALTGALSFA    50
NAKPGVVRAL IMERADPVLF EMSYDYVGDL SETVALMWPR LEGAPTHAPL 100
LSEIVHGLST LSRSTLPRRL ADWLDGLDET GRWALLKLIT GAMRVGASAR 150
LAKTALASLG SVTPDEVELV WPGLAPPYEE LFAWVEGHGP RPETSNPAPF 200
RPVMLAHAIE EANFADLAPG DFSAEWKWDG IRVQAVAGTG ADGVRAVRLY 250
SRTGEDISEA FPDLADAIAF NGAMDGELLI VRAGRVEPFN VLQQRLNRKS 300
VTVKMLAEFP AHIRAYDLLV DGDEDLRALP FTARRARLEA LVTRLSSPRI 350
DLSPLVPFAG WDDLTRARAD PASAGAGPDA GAVEGVMIKR GDSPYLPGRP 400
KGPWWKWKRD PHTVDAVLMY AQRGHGKRSS FYSDYTFGVW TQGEEGDVLV 450
PVGKAYFGFT DEELKLIDAF VRRATINRFG PVREVVHEKD EGLVLEVAFE 500
GLARSTRHRS GIAMRFPRIA RLRWDKPPGE ADRLETLEAL LR 542
Length:542
Mass (Da):59,821
Last modified:September 11, 2007 - v1
Checksum:i9E8B16F69E63C577
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000781 Genomic DNA. Translation: ABS66718.1.
RefSeqiWP_012113491.1. NC_009720.1.
YP_001416375.1. NC_009720.1.

Genome annotation databases

EnsemblBacteriaiABS66718; ABS66718; Xaut_1470.
GeneIDi5420779.
KEGGixau:Xaut_1470.
PATRICi24044945. VBIXanAut29526_1769.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000781 Genomic DNA. Translation: ABS66718.1 .
RefSeqi WP_012113491.1. NC_009720.1.
YP_001416375.1. NC_009720.1.

3D structure databases

ProteinModelPortali A7IFC5.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 78245.Xaut_1470.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABS66718 ; ABS66718 ; Xaut_1470 .
GeneIDi 5420779.
KEGGi xau:Xaut_1470.
PATRICi 24044945. VBIXanAut29526_1769.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi RVWLWSR.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci XAUT78245:GHS6-1484-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-1158 / Py2.

Entry informationi

Entry nameiA7IFC5_XANP2
AccessioniPrimary (citable) accession number: A7IFC5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 11, 2007
Last sequence update: September 11, 2007
Last modified: September 3, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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