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A7IFC5

- A7IFC5_XANP2

UniProt

A7IFC5 - A7IFC5_XANP2

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Xaut_1470

Organism
Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 44 (01 Oct 2014)
      Sequence version 1 (11 Sep 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciXAUT78245:GHS6-1484-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Xaut_1470Imported
    OrganismiXanthobacter autotrophicus (strain ATCC BAA-1158 / Py2)Imported
    Taxonomic identifieri78245 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesXanthobacteraceaeXanthobacter
    ProteomesiUP000002417: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi78245.Xaut_1470.

    Structurei

    3D structure databases

    ProteinModelPortaliA7IFC5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiRVWLWSR.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A7IFC5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNRFAALLDR MSYEAGRNAK IRLMADYFRT TPDPERGFAL AALTGALSFA    50
    NAKPGVVRAL IMERADPVLF EMSYDYVGDL SETVALMWPR LEGAPTHAPL 100
    LSEIVHGLST LSRSTLPRRL ADWLDGLDET GRWALLKLIT GAMRVGASAR 150
    LAKTALASLG SVTPDEVELV WPGLAPPYEE LFAWVEGHGP RPETSNPAPF 200
    RPVMLAHAIE EANFADLAPG DFSAEWKWDG IRVQAVAGTG ADGVRAVRLY 250
    SRTGEDISEA FPDLADAIAF NGAMDGELLI VRAGRVEPFN VLQQRLNRKS 300
    VTVKMLAEFP AHIRAYDLLV DGDEDLRALP FTARRARLEA LVTRLSSPRI 350
    DLSPLVPFAG WDDLTRARAD PASAGAGPDA GAVEGVMIKR GDSPYLPGRP 400
    KGPWWKWKRD PHTVDAVLMY AQRGHGKRSS FYSDYTFGVW TQGEEGDVLV 450
    PVGKAYFGFT DEELKLIDAF VRRATINRFG PVREVVHEKD EGLVLEVAFE 500
    GLARSTRHRS GIAMRFPRIA RLRWDKPPGE ADRLETLEAL LR 542
    Length:542
    Mass (Da):59,821
    Last modified:September 11, 2007 - v1
    Checksum:i9E8B16F69E63C577
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000781 Genomic DNA. Translation: ABS66718.1.
    RefSeqiWP_012113491.1. NC_009720.1.
    YP_001416375.1. NC_009720.1.

    Genome annotation databases

    EnsemblBacteriaiABS66718; ABS66718; Xaut_1470.
    GeneIDi5420779.
    KEGGixau:Xaut_1470.
    PATRICi24044945. VBIXanAut29526_1769.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000781 Genomic DNA. Translation: ABS66718.1 .
    RefSeqi WP_012113491.1. NC_009720.1.
    YP_001416375.1. NC_009720.1.

    3D structure databases

    ProteinModelPortali A7IFC5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 78245.Xaut_1470.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABS66718 ; ABS66718 ; Xaut_1470 .
    GeneIDi 5420779.
    KEGGi xau:Xaut_1470.
    PATRICi 24044945. VBIXanAut29526_1769.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi RVWLWSR.
    OrthoDBi EOG6Q8HXT.

    Enzyme and pathway databases

    BioCyci XAUT78245:GHS6-1484-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC BAA-1158 / Py2Imported.

    Entry informationi

    Entry nameiA7IFC5_XANP2
    AccessioniPrimary (citable) accession number: A7IFC5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 11, 2007
    Last sequence update: September 11, 2007
    Last modified: October 1, 2014
    This is version 44 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3