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Protein

50S ribosomal protein L30e

Gene

rpl30e

Organism
Methanoregula boonei (strain DSM 21154 / JCM 14090 / 6A8)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciMBOO456442:GH2T-1967-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L30eUniRule annotation
Gene namesi
Name:rpl30eUniRule annotation
Ordered Locus Names:Mboo_1930
OrganismiMethanoregula boonei (strain DSM 21154 / JCM 14090 / 6A8)
Taxonomic identifieri456442 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanomicrobialesMethanoregulaceaeMethanoregula
Proteomesi
  • UP000002408 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 979750S ribosomal protein L30ePRO_1000081312Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi456442.Mboo_1930.

Structurei

3D structure databases

ProteinModelPortaliA7I9N4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L30e family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG01752. Archaea.
COG1911. LUCA.
HOGENOMiHOG000055224.
KOiK02908.
OMAiDIPVYEF.

Family and domain databases

Gene3Di3.30.1330.30. 1 hit.
HAMAPiMF_00481. Ribosomal_L30e. 1 hit.
InterProiIPR029064. L30e-like.
IPR000231. Ribosomal_L30e.
IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
[Graphical view]
PANTHERiPTHR11449. PTHR11449. 1 hit.
PfamiPF01248. Ribosomal_L7Ae. 1 hit.
[Graphical view]
SUPFAMiSSF55315. SSF55315. 1 hit.

Sequencei

Sequence statusi: Complete.

A7I9N4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDFNASLRRA IKTGDVILGQ NNTEKCIKEG KAQMVVIAAN CPENFRSQLG
60 70 80 90
SYENLFIHTF EGSSVALGKA CGKPFMVSTL AIVSPGESDI LSLKRTA
Length:97
Mass (Da):10,437
Last modified:September 11, 2007 - v1
Checksum:i9E6A1E440E4B7595
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000780 Genomic DNA. Translation: ABS56445.1.
RefSeqiWP_012107500.1. NC_009712.1.

Genome annotation databases

EnsemblBacteriaiABS56445; ABS56445; Mboo_1930.
GeneIDi5411015.
KEGGimbn:Mboo_1930.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000780 Genomic DNA. Translation: ABS56445.1.
RefSeqiWP_012107500.1. NC_009712.1.

3D structure databases

ProteinModelPortaliA7I9N4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi456442.Mboo_1930.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABS56445; ABS56445; Mboo_1930.
GeneIDi5411015.
KEGGimbn:Mboo_1930.

Phylogenomic databases

eggNOGiarCOG01752. Archaea.
COG1911. LUCA.
HOGENOMiHOG000055224.
KOiK02908.
OMAiDIPVYEF.

Enzyme and pathway databases

BioCyciMBOO456442:GH2T-1967-MONOMER.

Family and domain databases

Gene3Di3.30.1330.30. 1 hit.
HAMAPiMF_00481. Ribosomal_L30e. 1 hit.
InterProiIPR029064. L30e-like.
IPR000231. Ribosomal_L30e.
IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
[Graphical view]
PANTHERiPTHR11449. PTHR11449. 1 hit.
PfamiPF01248. Ribosomal_L7Ae. 1 hit.
[Graphical view]
SUPFAMiSSF55315. SSF55315. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRL30E_METB6
AccessioniPrimary (citable) accession number: A7I9N4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: September 11, 2007
Last modified: September 7, 2016
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.