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A7I956 (A7I956_METB6) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.1.1.133 EMBL ABS56267.1
Gene names
Ordered Locus Names:Mboo_1750 EMBL ABS56267.1
OrganismMethanoregula boonei (strain 6A8) [Complete proteome] [HAMAP] EMBL ABS56267.1
Taxonomic identifier456442 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaMethanomicrobiaMethanomicrobialesMethanoregulaceaeMethanoregula

Protein attributes

Sequence length283 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionOxidoreductase EMBL ABS56267.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processextracellular polysaccharide biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functiondTDP-4-dehydrorhamnose reductase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A7I956 [UniParc].

Last modified September 11, 2007. Version 1.
Checksum: 1186955AE4F974DC

FASTA28331,510
        10         20         30         40         50         60 
MRVLITGVNG QLGQDIRKVC EQNSIDHIAT GSKELNISNV SEVQHFVKKN PVDVIINCAA 

        70         80         90        100        110        120 
YNAVDLAETE WKKAYRVNGL GVRNLATAAN SLGAVFVHFS TDYVFDGKSR LPYTIADLPR 

       130        140        150        160        170        180 
PISRYGMSKL LGETMTRDIA DTFILIRTSW VFGKGNDNFP KKIMGWSKNK TELKVVDDQV 

       190        200        210        220        230        240 
ASPTYTADLA KATLDLILKN ARGMYHITNS GYCSRYEWAE FLLAKVGWKG NLVRGSSDEF 

       250        260        270        280 
MSAAQRPAYS VLDNFGTPEC LGYSLPDWKD ATERFLQDLE AVS 

« Hide

References

[1]"Complete sequence of Candidatus Methanoregula boonei 6A8."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Meincke L., Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Kim E., Zinder S., Richardson P.
Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 6A8 EMBL ABS56267.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000780 Genomic DNA. Translation: ABS56267.1.
RefSeqYP_001404910.1. NC_009712.1.

3D structure databases

ProteinModelPortalA7I956.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING456442.Mboo_1750.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABS56267; ABS56267; Mboo_1750.
GeneID5409911.
KEGGmbn:Mboo_1750.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1091.
HOGENOMHOG000227711.
KOK00067.
OMAPYWRDSL.
ProtClustDBCLSK949972.

Enzyme and pathway databases

BioCycMBOO456442:GH2T-1780-MONOMER.

Family and domain databases

Gene3D3.40.50.720. 1 hit.
InterProIPR005913. dTDP_dehydrorham_reduct.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PfamPF04321. RmlD_sub_bind. 1 hit.
[Graphical view]
TIGRFAMsTIGR01214. rmlD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA7I956_METB6
AccessionPrimary (citable) accession number: A7I956
Entry history
Integrated into UniProtKB/TrEMBL: September 11, 2007
Last sequence update: September 11, 2007
Last modified: October 16, 2013
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)