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Protein
Submitted name:

DNA ligase (Polydeoxyribonucleotide synthase [ATP])

Gene

CHAB381_0782

Organism
Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCHOM360107:GHCX-787-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase (Polydeoxyribonucleotide synthase [ATP])Imported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:CHAB381_0782Imported
OrganismiCampylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A)Imported
Taxonomic identifieri360107 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesCampylobacteraceaeCampylobacter
ProteomesiUP000002407: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi360107.CHAB381_0782.

Structurei

3D structure databases

ProteinModelPortaliA7I1G5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000293070.
KOiK10747.
OMAiVRGYWDG.
OrthoDBiEOG60919Q.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A7I1G5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKIYKILIIL LSFFSILNGE NLMLLGEYKE GIDVKGWVVS EKYDGIRAVW
60 70 80 90 100
DGKNLISRSG KKFNAPKFWL ENFPNFKIDG ELWTARNDFE NLSSIVRDKI
110 120 130 140 150
PDKEWNNVKF MIFDVPDAKG DLFSRLEVLK DFLDKNPNNF IKIIKQISVN
160 170 180 190 200
SNKDVKKYFN DVIQKGGEGV VVRDPKEPYV NKRSNKILKL KQFHDDECEV
210 220 230 240 250
IKINMGNGKY SGKMGSLSCK NLKNGAVFKI GSGFDDKLRE NPPKIGDIVT
260 270
YKFQNLTKNG KPRFPVFLRI RDDFQ
Length:275
Mass (Da):31,776
Last modified:September 11, 2007 - v1
Checksum:i38ECED99C9E5D347
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000776 Genomic DNA. Translation: ABS51235.1.
RefSeqiWP_012108645.1. NC_009714.1.
YP_001406356.1. NC_009714.1.

Genome annotation databases

EnsemblBacteriaiABS51235; ABS51235; CHAB381_0782.
GeneIDi5408599.
KEGGicha:CHAB381_0782.
PATRICi20039710. VBICamHom81367_0754.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000776 Genomic DNA. Translation: ABS51235.1.
RefSeqiWP_012108645.1. NC_009714.1.
YP_001406356.1. NC_009714.1.

3D structure databases

ProteinModelPortaliA7I1G5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi360107.CHAB381_0782.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABS51235; ABS51235; CHAB381_0782.
GeneIDi5408599.
KEGGicha:CHAB381_0782.
PATRICi20039710. VBICamHom81367_0754.

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000293070.
KOiK10747.
OMAiVRGYWDG.
OrthoDBiEOG60919Q.

Enzyme and pathway databases

BioCyciCHOM360107:GHCX-787-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Campylobacter hominis ATCC BAA-381, a commensal isolated from the human gastrointestinal tract."
    Fouts D.E., Mongodin E.F., Puiu D., Sebastian Y., Miller W.G., Mandrell R.E., Nelson K.E.
    Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001AImported.

Entry informationi

Entry nameiA7I1G5_CAMHC
AccessioniPrimary (citable) accession number: A7I1G5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 11, 2007
Last sequence update: September 11, 2007
Last modified: March 4, 2015
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.