A7HU56 (A7HU56_PARL1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Exodeoxyribonuclease I EMBL ABS63439.1
EC=3.1.11.1 EMBL ABS63439.1

Gene names

Ordered Locus Names:

Plav_1822

Organism

Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) [Complete proteome] [HAMAP] EMBL ABS63439.1

Taxonomic identifier

402881 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Phyllobacteriaceae › Parvibaculum › Parvibaculum lavamentivorans

Protein attributes

Sequence length	468 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABS63439.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	exodeoxyribonuclease I activity Inferred from electronic annotation. Source: EC nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A7HU56 [UniParc]. Last modified September 11, 2007. Version 1. Checksum: 737E7706158B61E8	FASTA	468	53,394
	10 20 30 40 50 60 MSFVFFDTET TGLRHGFDQI VHFAAIRTDA DLNEIDRFEA HSRLLPHVVP HPFALYTNGL 70 80 90 100 110 120 SIGRLTDDGL PSHYVMVQTI RRKLLSWSPS IFVGYNSIRF DEEMLRQAFF QTLHPAYLTS 130 140 150 160 170 180 NHGNCRADAL GLMTAAAALS PSCLLVPFGA TGRPTFRLEQ LASANGIEHT RAHDAMADVL 190 200 210 220 230 240 ATLGLCRCVY ERSSELWQRF VRFSKKATVA DFVDSEDAFI LTEFFSNEAY HAPVVCLGRD 250 260 270 280 290 300 PEQPNGRLCL RLDGDVGRFY TMSDEDLRVE LARKPSPIRR FRINAAPTLT ALYDARDQML 310 320 330 340 350 360 NGIDLDEVET RARRVKDDPT FCAHLISAYA SIRGPHAPSR HVEEQIYDRF PGPDDEARME 370 380 390 400 410 420 RFHKVGWREV LSIVQSFEDE RLRCFGLRLV YFEHRSVLPE EIRLRVEREL TDRLVEEESG 430 440 450 460 GLTLRRALQE TDALLGSDYT DTNGILADYR AYLVDRITRV SNFRHSIS

References

[1]

"Complete genome sequence and annotation of Parvibaculum lavamentivorans DS-1." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P. Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DS-1 / DSM 13023 / NCIMB 13966.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000774 Genomic DNA. Translation: ABS63439.1.
RefSeq	YP_001413096.1. NC_009719.1.
3D structure databases
ProteinModelPortal	A7HU56.
ModBase	Search...
Protein-protein interaction databases
STRING	402881.Plav_1822.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABS63439; ABS63439; Plav_1822.
GeneID	5457007.
KEGG	pla:Plav_1822.
PATRIC	22865301. VBIParLav90819_1877.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2925.
HOGENOM	HOG000003908.
KO	K01141.
OMA	IRFDEEM.
ProtClustDB	CLSK910428.
Enzyme and pathway databases
BioCyc	PLAV402881:GHQA-1872-MONOMER.
Family and domain databases
InterPro	IPR023607. Exodeoxyribonuclease_I. IPR013620. Exonuc_X-T_C. IPR013520. Exonuclease_RNaseT/DNA_pol3. IPR012337. RNaseH-like_dom. [Graphical view]
Pfam	PF08411. Exonuc_X-T_C. 1 hit. PF00929. RNase_T. 1 hit. [Graphical view]
PIRSF	PIRSF000977. Exodeoxyribonuclease_I. 1 hit.
SUPFAM	SSF53098. RNaseH_fold. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A7HU56_PARL1

Accession

Primary (citable) accession number: A7HU56

Entry history

Integrated into UniProtKB/TrEMBL:	September 11, 2007
Last sequence update:	September 11, 2007
Last modified:	May 1, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)