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A7HQK0 (A7HQK0_PARL1) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Plav_0560
OrganismParvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) [Complete proteome] [HAMAP]
Taxonomic identifier402881 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeParvibaculum

Protein attributes

Sequence length917 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionTransferase EMBL ABS62183.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncation binding

Inferred from electronic annotation. Source: InterPro

transferase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A7HQK0 [UniParc].

Last modified September 11, 2007. Version 1.
Checksum: 2AE31AFFED1A81DF

FASTA917103,109
        10         20         30         40         50         60 
MMDRPDPASL PAEPSPDAPK DNPRSWRHSV FVRQAAFFFI VLPLVIAANL AVWAAFNQPH 

        70         80         90        100        110        120 
HAEAWTGEIV GLSYSPYRQG QDPTQNRHPS VAQMEEDMVQ LSGTVQAIRT YSVIRGQENI 

       130        140        150        160        170        180 
PELAAKYGLS VAVGAWIGPD LERNERELEV LISLAPRRNV VRVLVGNEAL LRNDLPVEDL 

       190        200        210        220        230        240 
IEYIKRAKEK IWKPLSTAEP PHIWLNNPDL VDAVDYIAVQ LLPYWEGIPI NEAVNSVFER 

       250        260        270        280        290        300 
LDELREAYPG KPIVVTEVGW PSRGKIIPRR PYPGLPEWEL KTEAVPSLVN QATFMREFLN 

       310        320        330        340        350        360 
RAKAEDITYY VMEAFDQPWK AAEEGAAGAF WGIYNADRQP KFPMAGSISE APEWRFWASL 

       370        380        390        400        410        420 
AAGLALVPAM LFMLRQRHVR PVGVVFFAVL TQIAGSAIAW AGLSVTGLYF TWVGITVWSF 

       430        440        450        460        470        480 
LFFAQGLLLI VLLAEAIEFV EVIWTRHGSR HFKPFDENAV SPTAMVSIHV PIHNEPPEMV 

       490        500        510        520        530        540 
RETLQALANL DYDNYEVLVL DNNTVDPEVW QPVRDYCAQL GPRFRFFHLE NWPGFKAGAL 

       550        560        570        580        590        600 
NFGLEKTAEE AEIIAVIDSD YQVEPSWLKV LVPYFDKQDV GFVQGPQDYR DRHESAFKNM 

       610        620        630        640        650        660 
AYWEYAGFFH IGMVQRNNFN AIIQHGTMTQ VRKSALKRVG GWAEWCICED AELGIKLYRA 

       670        680        690        700        710        720 
GYDSVYVNHS FGRGLTPDTL SGYITQRFRW AYGAVQIVKH HWDALAPWAS SKKGLTGAQR 

       730        740        750        760        770        780 
YYFLAGWLPW FADGLALLFT TASIVLSAWA LYQPHMVSLP VAAFLIPTIG SFVFKFVRSL 

       790        800        810        820        830        840 
WLYAVRVRDC SFIESLGAGV AALGLTHTVA KAMLNGMITT SKPFIRTPKC EDKPPLAAAF 

       850        860        870        880        890        900 
IQVREETVML VLLWGLTAGF LLSPDFADSQ SRLWVGVLLV QSVPYASAVL LSLINVMPSL 

       910 
FRRKKKEEPA GVLSPAE 

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References

[1]"Complete genome sequence and annotation of Parvibaculum lavamentivorans DS-1."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P.
Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DS-1 / DSM 13023 / NCIMB 13966.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000774 Genomic DNA. Translation: ABS62183.1.
RefSeqYP_001411840.1. NC_009719.1.

3D structure databases

ProteinModelPortalA7HQK0.
ModBaseSearch...

Protein-protein interaction databases

STRINGA7HQK0.

Protein family/group databases

CAZyGH17. Glycoside Hydrolase Family 17.
GT2. Glycosyltransferase Family 2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5456473.
GenomeReviewsGene locus Plav_0560 in contig CP000774_GR.
KEGGpla:Plav_0560.
PATRIC22862668. VBIParLav90819_0577.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1215.
HOGENOMHBG320835.
OMAIQHGTMT.
ProtClustDBCLSK866372.

Family and domain databases

InterProIPR013781. Glyco_hydro_subgr_catalytic.
IPR001173. Glyco_trans_2.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PfamPF00535. Glycos_transf_2. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA7HQK0_PARL1
AccessionPrimary (citable) accession number: A7HQK0
Entry history
Integrated into UniProtKB/TrEMBL: September 11, 2007
Last sequence update: September 11, 2007
Last modified: December 14, 2011
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)