A7HQE3 (A7HQE3_PARL1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Proline iminopeptidase RuleBase RU003421
EC=3.4.11.5 RuleBase RU003421

Gene names

Ordered Locus Names:

Plav_0503

Organism

Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) [Complete proteome] [HAMAP]

Taxonomic identifier

402881 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Phyllobacteriaceae › Parvibaculum

Protein attributes

Sequence length	326 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Release of N-terminal proline from a peptide. RuleBase RU003421
Sequence similarities	Belongs to the peptidase S33 family. RuleBase RU003421

Ontologies

Keywords
Molecular function	Aminopeptidase RuleBase RU003421 EMBL ABS62126.1 Hydrolase Protease
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	proteolysis Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	aminopeptidase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Active site	119	1	Nucleophile By similarity PIRSR PIRSR006431-1
	Active site	275	1	By similarity PIRSR PIRSR006431-1
	Active site	303	1	Proton donor By similarity PIRSR PIRSR006431-1

Sequences

	Sequence		Length	Mass (Da)
	A7HQE3 [UniParc]. Last modified September 11, 2007. Version 1. Checksum: F1347C5CD7206AF2	FASTA	326	36,751
	10 20 30 40 50 60 MPDTTPAATR RTLYPEIEPY RTGSLKVSDL HTLYFEECGN PKGKPVVIVH GGPGGGTNPT 70 80 90 100 110 120 MRRTHNPDAY RIILFDQRGC GKSTPHAELR ENTTWDLVAD MERLREHLGI DRWQLCGGSW 130 140 150 160 170 180 GSTLALAYGE THPARVTEII LRGIFTLRKR ELHWFYQEGT DALFPDAWEE FIAPIPEAER 190 200 210 220 230 240 GNLMAAYYKR LTGDNEAEKL ACARAWSIWE GTTLSLYSDP ERVKRFADGH FALAFARIEC 250 260 270 280 290 300 HYFMNKGWFE PQNQLIREAG KLKGIPGVIA QGRYDVVTPM FTAWELAKAW PEAELTIVPD 310 320 AGHTATEPGI VDVMVRASDR YAAVKN

References

[1]

"Complete genome sequence and annotation of Parvibaculum lavamentivorans DS-1." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P. Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DS-1 / DSM 13023 / NCIMB 13966.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000774 Genomic DNA. Translation: ABS62126.1.
RefSeq	YP_001411783.1. NC_009719.1.
3D structure databases
ProteinModelPortal	A7HQE3.
SMR	A7HQE3. Positions 11-322.
ModBase	Search...
Protein-protein interaction databases
STRING	A7HQE3.
Protein family/group databases
MEROPS	S33.001.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5455588.
GenomeReviews	Gene locus Plav_0503 in contig CP000774_GR.
KEGG	pla:Plav_0503.
PATRIC	22862542. VBIParLav90819_0517.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0596.
HOGENOM	HBG677789.
OMA	AELDWYY.
Family and domain databases
InterPro	IPR000073. AB_hydrolase_1. IPR005944. Pept_S33. IPR002410. Peptidase_S33. [Graphical view]
KO	K01259.
PANTHER	PTHR10992:SF12. PTHR10992:SF12. 1 hit.
Pfam	PF00561. Abhydrolase_1. 1 hit. [Graphical view]
PIRSF	PIRSF006431. Pept_S33. 1 hit.
PRINTS	PR00111. ABHYDROLASE. PR00793. PROAMNOPTASE.
TIGRFAMs	TIGR01249. Pro_imino_pep_1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A7HQE3_PARL1

Accession

Primary (citable) accession number: A7HQE3

Entry history

Integrated into UniProtKB/TrEMBL:	September 11, 2007
Last sequence update:	September 11, 2007
Last modified:	December 14, 2011
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)