A7HPB2 (A7HPB2_PARL1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Superoxide dismutase [Cu-Zn] RuleBase RU000393
EC=1.15.1.1 RuleBase RU000393

Gene names

Ordered Locus Names:

Plav_0122

Organism

Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) [Complete proteome] [HAMAP] EMBL ABS61745.1

Taxonomic identifier

402881 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Phyllobacteriaceae › Parvibaculum › Parvibaculum lavamentivorans

Protein attributes

Sequence length	179 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000393
Catalytic activity	2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000393
Cofactor	Binds 1 copper ion per subunit By similarity. RuleBase RU000393 Binds 1 zinc ion per subunit By similarity. RuleBase RU000393
Sequence similarities	Belongs to the Cu-Zn superoxide dismutase family. RuleBase RU000393

Ontologies

Keywords
Domain	Signal EMBL ABS61745.1
Ligand	Copper RuleBase RU000393 Metal-binding RuleBase RU000393 Zinc RuleBase RU000393
Molecular function	Oxidoreductase RuleBase RU000393
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 23	23	Potential EMBL ABS61745.1
	Chain	24 – 179	156	Potential EMBL ABS61745.1		PRO_5000267319

Sequences

	Sequence		Length	Mass (Da)
	A7HPB2 [UniParc]. Last modified September 11, 2007. Version 1. Checksum: 6EF412AD1D7E071A	FASTA	179	18,593
	10 20 30 40 50 60 MSGFRLGALA AVFSLAALPA LAADTPIATA TFKSSAQDDI GTADLSEGPE GVLMRVNVEG 70 80 90 100 110 120 LTPGWHGIHF HATGDCSDEG FKKSGAHVQH GEKEPHGLLN PEGPDDGDLP NLYVAEDGTG 130 140 150 160 170 QAEMFSERVT LTGEDDDRAH LLDEDGAAIV IHANADDHMS QPIGGAGDRV ACAVIEKVQ

References

[1]

"Complete genome sequence and annotation of Parvibaculum lavamentivorans DS-1." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P. Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DS-1 / DSM 13023 / NCIMB 13966.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000774 Genomic DNA. Translation: ABS61745.1.
RefSeq	YP_001411402.1. NC_009719.1.
3D structure databases
ProteinModelPortal	A7HPB2.
ModBase	Search...
Protein-protein interaction databases
STRING	402881.Plav_0122.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABS61745; ABS61745; Plav_0122.
GeneID	5454607.
KEGG	pla:Plav_0122.
PATRIC	22861758. VBIParLav90819_0130.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2032.
HOGENOM	HOG000263448.
KO	K04565.
OMA	DKAGMND.
Enzyme and pathway databases
BioCyc	PLAV402881:GHQA-172-MONOMER.
Family and domain databases
Gene3D	2.60.40.200. 1 hit.
InterPro	IPR024134. SOD_Cu/Zn_/chaperones. IPR018152. SOD_Cu/Zn_BS. IPR001424. SOD_Cu_Zn_dom. [Graphical view]
PANTHER	PTHR10003. PTHR10003. 1 hit.
Pfam	PF00080. Sod_Cu. 1 hit. [Graphical view]
SUPFAM	SSF49329. SOD_Cu_Zn. 1 hit.
PROSITE	PS00087. SOD_CU_ZN_1. 1 hit. PS00332. SOD_CU_ZN_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A7HPB2_PARL1

Accession

Primary (citable) accession number: A7HPB2

Entry history

Integrated into UniProtKB/TrEMBL:	September 11, 2007
Last sequence update:	September 11, 2007
Last modified:	May 1, 2013
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)