A7HMY8 (A7HMY8_FERNB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Pullulanase, type I EMBL ABS61271.1

Gene names

Ordered Locus Names:

Fnod_1427

Organism

Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) [Complete proteome] [HAMAP] EMBL ABS61271.1

Taxonomic identifier

381764 [NCBI]

Taxonomic lineage

Bacteria › Thermotogae › Thermotogales › Thermotogaceae › Fervidobacterium

Protein attributes

Sequence length	841 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A7HMY8 [UniParc]. Last modified September 11, 2007. Version 1. Checksum: 76BB045F813D259F	FASTA	841	95,861
	10 20 30 40 50 60 MVNFSKKALV FLFLLAVVFS YAATELVIHY HRWDGNYDGW NLWIWWVEPI SKDGAAYQFT 70 80 90 100 110 120 EKDDFGVVAR VKFDETLTKV GIIVRLNEWK EKDVAMDRFI SIKDGKAEVW LLQGIEQIYT 130 140 150 160 170 180 TKPDTSPRVL FAQARAQDVI EAYLTGQVDT TKVSAKVTVD GVERKVAKVE KANPTDISKT 190 200 210 220 230 240 NHVKITLAEP IKLDEVNKDV QVEIEGYKPA RVIMMEILDK IYYDGPLGFE YSPTKTTIRV 250 260 270 280 290 300 WSPVSKTVDL LLYKNWDDKE PTKVVPMKYI GNGAWEAVLD GDWEGWFYRI RYFSYGEYRE 310 320 330 340 350 360 GVDYFSKAVT KNSAKSAIID LKKTNPSDWD KDVRPTMKAL EDAIIYEIHI ADMTGLDNSN 370 380 390 400 410 420 VKNKATYLGL TEKGTRGPNG VTTGLDHLVE LGVTHVHILP MFDFYTGDES ERDFEKSYNW 430 440 450 460 470 480 GYDPYLFTVP EGRYSTNPID PHVRINEVKQ MVKALHENGI RVILDMVFPH TFGIGVLSPF 490 500 510 520 530 540 DTAVPYYFYR IDKTGAYLNE SGVGNVMATE RPMLRKYVID TLKWWVLEYH VDGFRFDQMG 550 560 570 580 590 600 LMDKKTMLDL EKELHAIDPT ILLYGEPWGG WGAPIRFGKS DVGGTHIAAF NDEFRDAMRG 610 620 630 640 650 660 SVFNATVKGF LMGALAKETA IKRGVVGSIE YDDVIRSFAK DPEETINYVA CHDNHTLWDK 670 680 690 700 710 720 NYLAAQADTN IKWTEEMLKN AQKLAGAILL TSQGIPFLHA GQDFARTKKG DENSYNSPIS 730 740 750 760 770 780 INGLDYARKA EFIDVFNYYK GLIEIRKAHP AFRQRTADDI KKKITFLPTT RKMVAFTIKD 790 800 810 820 830 840 ENDSWKEILV IYNGDTKDQD FTLPEGTWNV VVDQQNAGTK VLYQVSGKIT VKSISAMVMY K

References

[1]

"Complete sequence of Fervidobacterium nodosum Rt17-B1." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Mikhailova N., Nelson K., Gogarten J.P., Noll K., Richardson P. Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 35602 / DSM 5306 / Rt17-B1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000771 Genomic DNA. Translation: ABS61271.1.
RefSeq	YP_001410928.1. NC_009718.1.
3D structure databases
ProteinModelPortal	A7HMY8.
SMR	A7HMY8. Positions 21-123.
ModBase	Search...
Protein-protein interaction databases
STRING	A7HMY8.
Protein family/group databases
CAZy	CBM41. Carbohydrate-Binding Module Family 41. CBM48. Carbohydrate-Binding Module Family 48. GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5452729.
GenomeReviews	Gene locus Fnod_1427 in contig CP000771_GR.
KEGG	fno:Fnod_1427.
PATRIC	21884403. VBIFerNod12464_1484.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1523.
HOGENOM	HBG697609.
OMA	MHKLSSS.
ProtClustDB	CLSK2300390.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR006047. Glyco_hydro_13_cat_dom. IPR004193. Glyco_hydro_13_N. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. IPR005323. PUD. IPR011840. PulA_typeI. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
KO	K01200.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 2 hits. PF02922. CBM_48. 1 hit. PF03714. PUD. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit. SSF81296. Ig_E-set. 1 hit.
TIGRFAMs	TIGR02104. PulA_typeI. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A7HMY8_FERNB

Accession

Primary (citable) accession number: A7HMY8

Entry history

Integrated into UniProtKB/TrEMBL:	September 11, 2007
Last sequence update:	September 11, 2007
Last modified:	December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)