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A7HL81 (A7HL81_FERNB) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.24 EMBL ABS60664.1
Gene names
Ordered Locus Names:Fnod_0811
OrganismFervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) [Complete proteome] [HAMAP] EMBL ABS60664.1
Taxonomic identifier381764 [NCBI]
Taxonomic lineageBacteriaThermotogaeThermotogalesThermotogaceaeFervidobacterium

Protein attributes

Sequence length1020 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A7HL81 [UniParc].

Last modified September 11, 2007. Version 1.
Checksum: A967C6E92192DFB8

FASTA1,020119,442
        10         20         30         40         50         60 
MKRSKDFEVR RLYRLLGELV PYSMIENFNF SGWIYEGKNI DLPFAWNYNG INHVVFSNKF 

        70         80         90        100        110        120 
SILRKNDFED VYIQAWFGGE SLVLIDEEPY GEINAYHKEL NITPFCDGEE HKIEVQTVAR 

       130        140        150        160        170        180 
GLFGTREESV FKYSRIVVYD NEIRKVIFFV KNVIDTIKET NNESLANALV NLADEFLSKL 

       190        200        210        220        230        240 
NIPHATENYI KTVKSDPAIV EQVSSVWSPA EFPYFESVYD KKVKENILNG FEIFREKLKS 

       250        260        270        280        290        300 
LRNLFPKFGK AYVAGHAHID YAWLWPVHET KRKIVRTFAN AVQLAKKYKN FVYIQSSAQM 

       310        320        330        340        350        360 
YEDLKSLYPE LFEQIRNLVK NGQWEPVGGM WVESDCNVPG VESLIRQFYY GQKFFEKEFG 

       370        380        390        400        410        420 
KISKVAWLPD VFGFSWFLPQ ILKQTGIDYF VTTKLNWNEA NDFPYDICKW RGIDGSEVIY 

       430        440        450        460        470        480 
YNFKNFEEGY NGRISAKSLI NTFSNFRQKE LTDKFFISFG YGDGGGGPSE EMCESYNPLN 

       490        500        510        520        530        540 
EIPGVPEVEY STTERFFSDL MQDLANAKLP IWDGELYLEL HRGTLTSQSR TKILHKIAED 

       550        560        570        580        590        600 
ELRTTEILNA LFLGDKQAQI DELWKVLLRN EFHDILPGSS IKEVYEDTEK ELNYVIEQCD 

       610        620        630        640        650        660 
VIQKSFFDGN DEIITIFNPS SFKQRISFEY NNFIKTNDCD KSLKTIKTYR GNYLCVSENE 

       670        680        690        700        710        720 
LKPFEILSFK VQREKSEFHN TQKFVDDYTI ENGLLLVHIY RDGSINIFNK VLKKWAFNEK 

       730        740        750        760        770        780 
GNVLVTAKDI PAYWENWDID YRTRNHYIVL KAEKIKIVED NEIRKVVEIF YDYEGSRIWQ 

       790        800        810        820        830        840 
YLILENESDE LKVETKIDWH HRRSILKVLF PTNVLSRYAK YDIDGGYIQR PTHDNTNFEQ 

       850        860        870        880        890        900 
ARFEVLGHRW IDVSQYDHGV CIINNGKYGH IVKGSTIEMT LVKAGIYPDF FADEGEQSFI 

       910        920        930        940        950        960 
YLIYLHGFED VKEFYARADK LNKKIKAFNG KPLTKGWNLN ISSDSLRVLS LRKVDEKIYL 

       970        980        990       1000       1010       1020 
RILETVGSSG TATIKLEGIN FKEVKFVDIL ENKISEVEFK EGKIELTYKP FKIYTIEFVL 

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References

[1]"Complete sequence of Fervidobacterium nodosum Rt17-B1."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Mikhailova N., Nelson K., Gogarten J.P., Noll K., Richardson P.
Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35602 / DSM 5306 / Rt17-B1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000771 Genomic DNA. Translation: ABS60664.1.
RefSeqYP_001410321.1. NC_009718.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGA7HL81.

Protein family/group databases

CAZyGH38. Glycoside Hydrolase Family 38.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5452146.
GenomeReviewsGene locus Fnod_0811 in contig CP000771_GR.
KEGGfno:Fnod_0811.
PATRIC21883081. VBIFerNod12464_0850.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0383.
HOGENOMHBG286952.
OMAWENWDID.
ProtClustDBCLSK875996.

Family and domain databases

InterProIPR011013. Glyco_hydro-type_carb-bd.
IPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR011682. Glyco_hydro_38_C.
IPR015341. Glyco_hydro_38_cen_dom.
IPR000602. Glyco_hydro_38_core.
[Graphical view]
Gene3DG3DSA:3.20.110.10. Glyco_hydro_38_core. 1 hit.
KOK01191.
PfamPF09261. Alpha-mann_mid. 1 hit.
PF01074. Glyco_hydro_38. 1 hit.
PF07748. Glyco_hydro_38C. 1 hit.
[Graphical view]
SMARTSM00872. Alpha-mann_mid. 1 hit.
[Graphical view]
SUPFAMSSF74650. Gal_mut_like. 1 hit.
SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA7HL81_FERNB
AccessionPrimary (citable) accession number: A7HL81
Entry history
Integrated into UniProtKB/TrEMBL: September 11, 2007
Last sequence update: September 11, 2007
Last modified: December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)