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A7HJT8 (GLGA_FERNB) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:Fnod_0306
OrganismFervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) [Complete proteome] [HAMAP]
Taxonomic identifier381764 [NCBI]
Taxonomic lineageBacteriaThermotogaeThermotogalesThermotogaceaeFervidobacterium

Protein attributes

Sequence length485 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 485485Glycogen synthase HAMAP-Rule MF_00484
PRO_1000072415

Sites

Binding site151ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
A7HJT8 [UniParc].

Last modified September 11, 2007. Version 1.
Checksum: 3EEA15489F1E4625

FASTA48556,137
        10         20         30         40         50         60 
MRIAMVSYEV YPFAKVGGLA DVVGALPKYL ERQNINVDIY MPYHKKVKQN AEKYGWAIEK 

        70         80         90        100        110        120 
ITEKVDASML RTEEKFEIYK TMLPGTKEVN VFLINNEYYF NADEVYAGPD LAEQAIFFSY 

       130        140        150        160        170        180 
SVIEAIRKLN FEYDIVHVND WQTALIPVYL KTVFRDDPLL SKIATVLTIH NLGYQGIFEP 

       190        200        210        220        230        240 
EYLRFAGLPD YLYNIDGIEF YGKINFLKGG IIFSDIINTV SPTYAKEIQQ KEYGEKLEGV 

       250        260        270        280        290        300 
LRARSSDLYG ILNGIDYEEF NPLTDNKIYV NYDLNTIEKK KENKKLLQKE LGLPERDVPM 

       310        320        330        340        350        360 
FGMINRLVDQ KGLDIMAEIM DYVSLFDIQF VLLGTGEEKY ENMFKKLGEK YPEKYSINLK 

       370        380        390        400        410        420 
FDIVLAQKIY AGCDMFLMPS RYEPCGLGQM YSLRYGTIPI VRYTGGLADT VKEYNPETKE 

       430        440        450        460        470        480 
GNGFGFEGFD PAHLLKAMAR AIYFYNSKED WNTLIKNAMT MDLSWDKSAK EYVKLYQRAK 


SKVQR 

« Hide

References

[1]"Complete sequence of Fervidobacterium nodosum Rt17-B1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Mikhailova N., Nelson K., Gogarten J.P., Noll K., Richardson P.
Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35602 / DSM 5306 / Rt17-B1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000771 Genomic DNA. Translation: ABS60171.1.
RefSeqYP_001409828.1. NC_009718.1.

3D structure databases

ProteinModelPortalA7HJT8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING381764.Fnod_0306.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABS60171; ABS60171; Fnod_0306.
GeneID5452383.
KEGGfno:Fnod_0306.
PATRIC21881985. VBIFerNod12464_0318.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294940.
KOK00703.
OMAVPAYLAW.
OrthoDBEOG6JTC6Z.

Enzyme and pathway databases

BioCycFNOD381764:GC5M-309-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_FERNB
AccessionPrimary (citable) accession number: A7HJT8
Entry history
Integrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: September 11, 2007
Last modified: May 14, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways