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Protein

Glycogen synthase

Gene

glgA

Organism
Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei15 – 151ADP-glucoseUniRule annotation

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciFNOD381764:GC5M-309-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:Fnod_0306
OrganismiFervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1)
Taxonomic identifieri381764 [NCBI]
Taxonomic lineageiBacteriaThermotogaeThermotogalesThermotogaceaeFervidobacterium
ProteomesiUP000002415: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 485485Glycogen synthasePRO_1000072415Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi381764.Fnod_0306.

Structurei

3D structure databases

ProteinModelPortaliA7HJT8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiNLQINGM.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

A7HJT8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRIAMVSYEV YPFAKVGGLA DVVGALPKYL ERQNINVDIY MPYHKKVKQN
60 70 80 90 100
AEKYGWAIEK ITEKVDASML RTEEKFEIYK TMLPGTKEVN VFLINNEYYF
110 120 130 140 150
NADEVYAGPD LAEQAIFFSY SVIEAIRKLN FEYDIVHVND WQTALIPVYL
160 170 180 190 200
KTVFRDDPLL SKIATVLTIH NLGYQGIFEP EYLRFAGLPD YLYNIDGIEF
210 220 230 240 250
YGKINFLKGG IIFSDIINTV SPTYAKEIQQ KEYGEKLEGV LRARSSDLYG
260 270 280 290 300
ILNGIDYEEF NPLTDNKIYV NYDLNTIEKK KENKKLLQKE LGLPERDVPM
310 320 330 340 350
FGMINRLVDQ KGLDIMAEIM DYVSLFDIQF VLLGTGEEKY ENMFKKLGEK
360 370 380 390 400
YPEKYSINLK FDIVLAQKIY AGCDMFLMPS RYEPCGLGQM YSLRYGTIPI
410 420 430 440 450
VRYTGGLADT VKEYNPETKE GNGFGFEGFD PAHLLKAMAR AIYFYNSKED
460 470 480
WNTLIKNAMT MDLSWDKSAK EYVKLYQRAK SKVQR
Length:485
Mass (Da):56,137
Last modified:September 11, 2007 - v1
Checksum:i3EEA15489F1E4625
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000771 Genomic DNA. Translation: ABS60171.1.
RefSeqiYP_001409828.1. NC_009718.1.

Genome annotation databases

EnsemblBacteriaiABS60171; ABS60171; Fnod_0306.
GeneIDi5452383.
KEGGifno:Fnod_0306.
PATRICi21881985. VBIFerNod12464_0318.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000771 Genomic DNA. Translation: ABS60171.1.
RefSeqiYP_001409828.1. NC_009718.1.

3D structure databases

ProteinModelPortaliA7HJT8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi381764.Fnod_0306.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABS60171; ABS60171; Fnod_0306.
GeneIDi5452383.
KEGGifno:Fnod_0306.
PATRICi21881985. VBIFerNod12464_0318.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiNLQINGM.
OrthoDBiEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayiUPA00164.
BioCyciFNOD381764:GC5M-309-MONOMER.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35602 / DSM 5306 / Rt17-B1.

Entry informationi

Entry nameiGLGA_FERNB
AccessioniPrimary (citable) accession number: A7HJT8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: September 11, 2007
Last modified: January 7, 2015
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.