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Protein
Submitted name:

Fumarate lyase

Gene

Fnod_0246

Organism
Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciFNOD381764:GC5M-249-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Fumarate lyaseImported
Gene namesi
Ordered Locus Names:Fnod_0246Imported
OrganismiFervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1)Imported
Taxonomic identifieri381764 [NCBI]
Taxonomic lineageiBacteriaThermotogaeThermotogalesFervidobacteriaceaeFervidobacterium
Proteomesi
  • UP000002415 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi381764.Fnod_0246.

Structurei

3D structure databases

ProteinModelPortaliA7HJN0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini14 – 337324Lyase_1InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4108IJ0. Bacteria.
COG1027. LUCA.
HOGENOMiHOG000061737.
KOiK01744.
OMAiPEAMNQT.
OrthoDBiEOG6V1M4M.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR024083. Fumarase/histidase_N.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A7HJN0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNCRTEKDYL GECLIPEDAY YGVTTQRALE LFPSTGEILD DKFIWAYFMI
60 70 80 90 100
KKSAAILNSQ LGYLDNQIAQ AIQKACDEWE KLKSYIVVDP LSGGAGTSVN
110 120 130 140 150
LNINEVIANR ATELLGGKKG EYIVNPYNHV NLHQSTNDTF VTAGKIAVIV
160 170 180 190 200
RLRELVEAVI KLQEKIQEKE KEFYSIRTIA RTQLMDGVPI LMGQQFGAWA
210 220 230 240 250
DALARDRWRL NKVEERIRSV NIGGTAIGTG IGAPKEYVLK IVDVLRQVTN
260 270 280 290 300
VKIAKSENLI DATQNLDVFV EIHGLIKALG VNLFKISNDI RLLGSGPNAA
310 320 330 340 350
IGELELPKVQ IGSSIMPGKV NPVIPEYVMQ LVLAVFGHDE AISHATAQGN
360 370 380 390 400
LQLNQFAPLI VHYTLKSMQF LSKACNSLSD YIAQIKVKEE KCKEHLKKST
410 420 430 440 450
ANLTPLINYF GYERVAEKIV ETNWDIEKAI ELLAKEEGIS SQELVKKLNI

DKMTGLGYY
Length:459
Mass (Da):51,131
Last modified:September 11, 2007 - v1
Checksum:iB0B9AA5E943F9013
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000771 Genomic DNA. Translation: ABS60113.1.
RefSeqiWP_011993435.1. NC_009718.1.

Genome annotation databases

EnsemblBacteriaiABS60113; ABS60113; Fnod_0246.
KEGGifno:Fnod_0246.
PATRICi21881865. VBIFerNod12464_0258.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000771 Genomic DNA. Translation: ABS60113.1.
RefSeqiWP_011993435.1. NC_009718.1.

3D structure databases

ProteinModelPortaliA7HJN0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi381764.Fnod_0246.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABS60113; ABS60113; Fnod_0246.
KEGGifno:Fnod_0246.
PATRICi21881865. VBIFerNod12464_0258.

Phylogenomic databases

eggNOGiENOG4108IJ0. Bacteria.
COG1027. LUCA.
HOGENOMiHOG000061737.
KOiK01744.
OMAiPEAMNQT.
OrthoDBiEOG6V1M4M.

Enzyme and pathway databases

BioCyciFNOD381764:GC5M-249-MONOMER.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR024083. Fumarase/histidase_N.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35602 / DSM 5306 / Rt17-B1Imported.

Entry informationi

Entry nameiA7HJN0_FERNB
AccessioniPrimary (citable) accession number: A7HJN0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 11, 2007
Last sequence update: September 11, 2007
Last modified: March 16, 2016
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.