A7HC85 (A7HC85_ANADF) Unreviewed, UniProtKB/TrEMBL
Last modified
December 14, 2011.
Version 21.
History...
Names and origin
| Protein names | Submitted name: RNA-3'-phosphate cyclase EMBL ABS26331.1 EC=6.5.1.4 EMBL ABS26331.1 | ||
| Gene names |
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| Organism | Anaeromyxobacter sp. (strain Fw109-5) [Complete proteome] [HAMAP] | ||
| Taxonomic identifier | 404589 [NCBI] | ||
| Taxonomic lineage | Bacteria › Proteobacteria › Deltaproteobacteria › Myxococcales › Cystobacterineae › Myxococcaceae › Anaeromyxobacter |
Protein attributes
| Sequence length | 374 AA. |
| Sequence status | Complete. |
| Protein existence | Predicted |
Ontologies
| Keywords | |
|---|---|
| Molecular function | Ligase EMBL ABS26331.1 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | RNA processing Inferred from electronic annotation. Source: InterPro |
| Molecular function | RNA-3'-phosphate cyclase activity Inferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequences
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References
| [1] | "Complete sequence of Anaeromyxobacter sp. Fw109-5." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. Richardson P.Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Fw109-5. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP000769 Genomic DNA. Translation: ABS26331.1. |
| RefSeq | YP_001379315.1. NC_009675.1. |
3D structure databases | |
| ProteinModelPortal | A7HC85. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | A7HC85. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 5375511. |
| GenomeReviews | Gene locus Anae109_2128 in contig CP000769_GR. |
| KEGG | afw:Anae109_2128. |
| NMPDR | fig|404589.4.peg.1835. |
| PATRIC | 20929515. VBIAnaSp113478_2230. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| eggNOG | COG0430. |
| HOGENOM | HBG683539. |
| OMA | HYLALVW. |
| ProtClustDB | CLSK945799. |
Family and domain databases | |
| InterPro | IPR013791. RNA3'-term_phos_cycl_insert. IPR023797. RNA3'_phos_cyclase_dom. IPR000228. RNA3'_term_phos_cyc. IPR017770. RNA3'_term_phos_cyc_type_1. IPR013796. RNA3'_term_phos_cycl_insert. IPR013792. RNA3'P_cycl/enolpyr_Trfase_a/b. [Graphical view] |
| Gene3D | G3DSA:3.30.360.20. G3DSA:3.30.360.20. 1 hit. G3DSA:3.65.10.20. RNA3'_term_phos_cycl. 2 hits. |
| KO | K01974. |
| PANTHER | PTHR11096. RNA3'_term_phos_cycl. 1 hit. |
| Pfam | PF01137. RTC. 1 hit. PF05189. RTC_insert. 1 hit. [Graphical view] |
| SUPFAM | SSF52913. RNA3'-term_phos_cycl_insert. 1 hit. SSF55205. RNA3'_cycl/enolpyr_transf_A/B. 1 hit. |
| TIGRFAMs | TIGR03399. RNA_3prim_cycl. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | A7HC85_ANADF | ||||||||
| Accession | Primary (citable) accession number: A7HC85 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
