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A7H8V2

- A7H8V2_ANADF

UniProt

A7H8V2 - A7H8V2_ANADF

Protein
Submitted name:

DNA ligase D

Gene

Anae109_0939

Organism
Anaeromyxobacter sp. (strain Fw109-5)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 44 (01 Oct 2014)
      Sequence version 1 (11 Sep 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciASP404589:GHMT-943-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase DImported
    Gene namesi
    Ordered Locus Names:Anae109_0939Imported
    OrganismiAnaeromyxobacter sp. (strain Fw109-5)Imported
    Taxonomic identifieri404589 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeAnaeromyxobacteraceaeAnaeromyxobacter
    ProteomesiUP000006382: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi404589.Anae109_0939.

    Structurei

    3D structure databases

    ProteinModelPortaliA7H8V2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiFASEPRE.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A7H8V2-1 [UniParc]FASTAAdd to Basket

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    MPDRLERYRA KRDPERTPEP FGPAEAGARA LDAPRLFVVQ KHAARRLHWD    50
    FRLELGGTLR SWAVPKGPSA DPSDKRMAVE VEDHPIEYAN FEGIIPAGNY 100
    GAGAVIVWDR GTWRPVGDPY DGLARGKLVF QLSGHKLHGE WTLVRTRAAQ 150
    GGKQQWLLLK HRGDAWAGPG RPFPEESVLS GRLLEELAAG EGRAEAAVRA 200
    AEGLGAPRRA LADADARPML AETREGPFDA PGWLFELKYD GYRLVARREG 250
    SRVSLRYRSG EDATALYPEL AKALESWPLD AVLDGEVVVL GPDGRPSFQA 300
    LQGRAQLARP ADVARAALER PATYFVFDLL SLAGLDLRAL PLVERKRLLA 350
    EVAPRLGPVR LAEHVEARGE DLYREVRARG LEGIVAKRAD APYRAGRSAA 400
    WLKIRVERTG DFAIVGFTAP AGARARFGAL HLAVHDGEGL LYAGSVGTGF 450
    GERLLEELHA RLAPRARKTP PCRGAVPRGR GHTWVEPELV CEVRFREWTA 500
    EGLLRQPVFL RLREDKRPEE AVREVAPHEG PPPVPRPARA ERRVEVTNGA 550
    KVWFPAEGIT KAEVVDYYRA IAPFMLPYLR DRPVVLTRYP DGIDGKSFFQ 600
    KDAPEWRPEW IRTVRIRSEE AERDLDHFLV DDADGLAWIA NLGTIPLHVW 650
    ASRAGALERP DWCVVDLDPK EAPFEHVVRI ARALHALCDD LGLPSYPKTT 700
    GQKGLHVLVP LGGQLTHAQS RTLGELLARA VEGELPRLAT TARALSARGG 750
    RVYLDFLQNG YGKTIAAPYA VRPRPGAPVS TPLRWSEVTP RLDPARFTIR 800
    NVPARARRLR ADPLLPVLSE RPDLAAALER LRVRMGEGER AAARRRS 847
    Length:847
    Mass (Da):93,852
    Last modified:September 11, 2007 - v1
    Checksum:i0F918EBD12DFCD1E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000769 Genomic DNA. Translation: ABS25148.1.
    RefSeqiWP_011985254.1. NC_009675.1.
    YP_001378132.1. NC_009675.1.

    Genome annotation databases

    EnsemblBacteriaiABS25148; ABS25148; Anae109_0939.
    GeneIDi5373860.
    KEGGiafw:Anae109_0939.
    PATRICi20927007. VBIAnaSp113478_0988.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000769 Genomic DNA. Translation: ABS25148.1 .
    RefSeqi WP_011985254.1. NC_009675.1.
    YP_001378132.1. NC_009675.1.

    3D structure databases

    ProteinModelPortali A7H8V2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 404589.Anae109_0939.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABS25148 ; ABS25148 ; Anae109_0939 .
    GeneIDi 5373860.
    KEGGi afw:Anae109_0939.
    PATRICi 20927007. VBIAnaSp113478_0988.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi FASEPRE.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci ASP404589:GHMT-943-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Fw109-5Imported.

    Entry informationi

    Entry nameiA7H8V2_ANADF
    AccessioniPrimary (citable) accession number: A7H8V2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 11, 2007
    Last sequence update: September 11, 2007
    Last modified: October 1, 2014
    This is version 44 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3