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A7H8V2

- A7H8V2_ANADF

UniProt

A7H8V2 - A7H8V2_ANADF

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Protein
Submitted name:

DNA ligase D

Gene
Anae109_0939
Organism
Anaeromyxobacter sp. (strain Fw109-5)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciASP404589:GHMT-943-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase DImported
Gene namesi
Ordered Locus Names:Anae109_0939Imported
OrganismiAnaeromyxobacter sp. (strain Fw109-5)Imported
Taxonomic identifieri404589 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeMyxococcaceaeAnaeromyxobacter
ProteomesiUP000006382: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi404589.Anae109_0939.

Structurei

3D structure databases

ProteinModelPortaliA7H8V2.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiFASEPRE.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A7H8V2-1 [UniParc]FASTAAdd to Basket

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MPDRLERYRA KRDPERTPEP FGPAEAGARA LDAPRLFVVQ KHAARRLHWD    50
FRLELGGTLR SWAVPKGPSA DPSDKRMAVE VEDHPIEYAN FEGIIPAGNY 100
GAGAVIVWDR GTWRPVGDPY DGLARGKLVF QLSGHKLHGE WTLVRTRAAQ 150
GGKQQWLLLK HRGDAWAGPG RPFPEESVLS GRLLEELAAG EGRAEAAVRA 200
AEGLGAPRRA LADADARPML AETREGPFDA PGWLFELKYD GYRLVARREG 250
SRVSLRYRSG EDATALYPEL AKALESWPLD AVLDGEVVVL GPDGRPSFQA 300
LQGRAQLARP ADVARAALER PATYFVFDLL SLAGLDLRAL PLVERKRLLA 350
EVAPRLGPVR LAEHVEARGE DLYREVRARG LEGIVAKRAD APYRAGRSAA 400
WLKIRVERTG DFAIVGFTAP AGARARFGAL HLAVHDGEGL LYAGSVGTGF 450
GERLLEELHA RLAPRARKTP PCRGAVPRGR GHTWVEPELV CEVRFREWTA 500
EGLLRQPVFL RLREDKRPEE AVREVAPHEG PPPVPRPARA ERRVEVTNGA 550
KVWFPAEGIT KAEVVDYYRA IAPFMLPYLR DRPVVLTRYP DGIDGKSFFQ 600
KDAPEWRPEW IRTVRIRSEE AERDLDHFLV DDADGLAWIA NLGTIPLHVW 650
ASRAGALERP DWCVVDLDPK EAPFEHVVRI ARALHALCDD LGLPSYPKTT 700
GQKGLHVLVP LGGQLTHAQS RTLGELLARA VEGELPRLAT TARALSARGG 750
RVYLDFLQNG YGKTIAAPYA VRPRPGAPVS TPLRWSEVTP RLDPARFTIR 800
NVPARARRLR ADPLLPVLSE RPDLAAALER LRVRMGEGER AAARRRS 847
Length:847
Mass (Da):93,852
Last modified:September 11, 2007 - v1
Checksum:i0F918EBD12DFCD1E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000769 Genomic DNA. Translation: ABS25148.1.
RefSeqiWP_011985254.1. NC_009675.1.
YP_001378132.1. NC_009675.1.

Genome annotation databases

EnsemblBacteriaiABS25148; ABS25148; Anae109_0939.
GeneIDi5373860.
KEGGiafw:Anae109_0939.
PATRICi20927007. VBIAnaSp113478_0988.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000769 Genomic DNA. Translation: ABS25148.1 .
RefSeqi WP_011985254.1. NC_009675.1.
YP_001378132.1. NC_009675.1.

3D structure databases

ProteinModelPortali A7H8V2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 404589.Anae109_0939.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABS25148 ; ABS25148 ; Anae109_0939 .
GeneIDi 5373860.
KEGGi afw:Anae109_0939.
PATRICi 20927007. VBIAnaSp113478_0988.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000222509.
KOi K01971.
OMAi FASEPRE.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci ASP404589:GHMT-943-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Fw109-5Imported.

Entry informationi

Entry nameiA7H8V2_ANADF
AccessioniPrimary (citable) accession number: A7H8V2
Entry historyi
Integrated into UniProtKB/TrEMBL: September 11, 2007
Last sequence update: September 11, 2007
Last modified: September 3, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3