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Protein

tRNA pseudouridine synthase D

Gene

truD

Organism
Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs.UniRule annotation

Catalytic activityi

tRNA uridine(13) = tRNA pseudouridine(13).UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei85NucleophileUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomerase
Biological processtRNA processing

Enzyme and pathway databases

BioCyciCJEJ360109:G1G9I-1675-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
tRNA pseudouridine synthase DUniRule annotation (EC:5.4.99.27UniRule annotation)
Alternative name(s):
tRNA pseudouridine(13) synthaseUniRule annotation
tRNA pseudouridylate synthase DUniRule annotation
tRNA-uridine isomerase DUniRule annotation
Gene namesi
Name:truDUniRule annotation
Ordered Locus Names:JJD26997_1792
OrganismiCampylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97)
Taxonomic identifieri360109 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesCampylobacteraceaeCampylobacter
Proteomesi
  • UP000002302 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000847311 – 372tRNA pseudouridine synthase DAdd BLAST372

Structurei

3D structure databases

ProteinModelPortaliA7H5G6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini160 – 330TRUDUniRule annotationAdd BLAST171

Sequence similaritiesi

Belongs to the pseudouridine synthase TruD family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000224848
KOiK06176
OMAiGNRFFMR
OrthoDBiPOG091H03KK

Family and domain databases

HAMAPiMF_01082 TruD, 1 hit
InterProiView protein in InterPro
IPR020103 PsdUridine_synth_cat_dom_sf
IPR001656 PsdUridine_synth_TruD
IPR020119 PsdUridine_synth_TruD_CS
IPR011760 PsdUridine_synth_TruD_insert
PANTHERiPTHR13326 PTHR13326, 3 hits
PfamiView protein in Pfam
PF01142 TruD, 2 hits
SUPFAMiSSF55120 SSF55120, 2 hits
TIGRFAMsiTIGR00094 tRNA_TruD_broad, 1 hit
PROSITEiView protein in PROSITE
PS50984 TRUD, 1 hit
PS01268 UPF0024, 1 hit

Sequencei

Sequence statusi: Complete.

A7H5G6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNLAEENTIF KPLYSLKHSS INAYFSKNSD DFVVRERPLY EFSGKGEHLI
60 70 80 90 100
LHINKKDLST NEALKILSEQ SGVKMRDFGY AGLKDKQGST FQYLSIPKKF
110 120 130 140 150
ESFLSNFSHS KLKILETFTH ENKLRIGHLK GNSFFIRLKK VMPSDALKLE
160 170 180 190 200
QVLMNLDKQG FANYFGYQRF GKFGDNYKEG LEILRGKKMK NIKMKEFLIS
210 220 230 240 250
AFQSDLFNRY LSKRVELSHF ANDFSEKELL QIYKISKEEA KELKKQEQFF
260 270 280 290 300
KLLKGEVLGH YPFGKCFLCE DLSAELERFR ARDISAMGLL IGTKAYETGE
310 320 330 340 350
GLALNLENEI FKDALEFKAK MQGSRRFMWR YLEELKWRYD EEKAHFCIEF
360 370
FLQKGSYATV VLEEILHKNL PE
Length:372
Mass (Da):43,593
Last modified:September 11, 2007 - v1
Checksum:iA04B27831A9AA592
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000768 Genomic DNA Translation: ABS43609.1

Genome annotation databases

EnsemblBacteriaiABS43609; ABS43609; JJD26997_1792
KEGGicjd:JJD26997_1792

Similar proteinsi

Entry informationi

Entry nameiTRUD_CAMJD
AccessioniPrimary (citable) accession number: A7H5G6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: September 11, 2007
Last modified: March 28, 2018
This is version 67 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

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