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Protein

Probable chemoreceptor glutamine deamidase CheD

Gene

cheD

Organism
Clostridium botulinum (strain ATCC 19397 / Type A)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis.UniRule annotation

Catalytic activityi

Protein L-glutamine + H2O = protein L-glutamate + NH3.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

Chemotaxis

Enzyme and pathway databases

BioCyciCBOT441770:GH1E-2661-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable chemoreceptor glutamine deamidase CheDUniRule annotation (EC:3.5.1.44UniRule annotation)
Gene namesi
Name:cheDUniRule annotation
Ordered Locus Names:CLB_2692
OrganismiClostridium botulinum (strain ATCC 19397 / Type A)
Taxonomic identifieri441770 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 162162Probable chemoreceptor glutamine deamidase CheDPRO_1000073513Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliA7FX01.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the CheD family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000273195.
KOiK03411.
OMAiIGMIHIM.
OrthoDBiEOG6WHNQB.

Family and domain databases

HAMAPiMF_01440. CheD.
InterProiIPR005659. Chemorcpt_Glu_NH3ase_CheD.
IPR011324. Cytotoxic_necrot_fac-like_cat.
[Graphical view]
PfamiPF03975. CheD. 1 hit.
[Graphical view]
SUPFAMiSSF64438. SSF64438. 1 hit.

Sequencei

Sequence statusi: Complete.

A7FX01-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDIKEIKVGI ADLNVGKNPD KIITVGLGSC IGIALYDGIK CIGGLSHIML
60 70 80 90 100
PDSTQFSKVT NPMKFADLAI PILVEKMEKL GARKNGLKAK ICGGASMFNF
110 120 130 140 150
SDKSMVMDIG NRNGKAVKEK LKELSIPLLA EDIGGNKGRT MIFDTSTGKV
160
YIKTVGLGTK EI
Length:162
Mass (Da):17,318
Last modified:September 11, 2007 - v1
Checksum:i4B80D8090B8B68CF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000726 Genomic DNA. Translation: ABS35385.1.
RefSeqiWP_003359122.1. NC_009697.1.

Genome annotation databases

EnsemblBacteriaiABS35385; ABS35385; CLB_2692.
KEGGicba:CLB_2692.
PATRICi19359940. VBICloBot110701_2605.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000726 Genomic DNA. Translation: ABS35385.1.
RefSeqiWP_003359122.1. NC_009697.1.

3D structure databases

ProteinModelPortaliA7FX01.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABS35385; ABS35385; CLB_2692.
KEGGicba:CLB_2692.
PATRICi19359940. VBICloBot110701_2605.

Phylogenomic databases

HOGENOMiHOG000273195.
KOiK03411.
OMAiIGMIHIM.
OrthoDBiEOG6WHNQB.

Enzyme and pathway databases

BioCyciCBOT441770:GH1E-2661-MONOMER.

Family and domain databases

HAMAPiMF_01440. CheD.
InterProiIPR005659. Chemorcpt_Glu_NH3ase_CheD.
IPR011324. Cytotoxic_necrot_fac-like_cat.
[Graphical view]
PfamiPF03975. CheD. 1 hit.
[Graphical view]
SUPFAMiSSF64438. SSF64438. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Analysis of the neurotoxin complex genes in Clostridium botulinum A1-A4 and B1 strains: BoNT/A3, /Ba4 and /B1 clusters are located within plasmids."
    Smith T.J., Hill K.K., Foley B.T., Detter J.C., Munk A.C., Bruce D.C., Doggett N.A., Smith L.A., Marks J.D., Xie G., Brettin T.S.
    PLoS ONE 2:E1271-E1271(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 19397 / Type A.

Entry informationi

Entry nameiCHED_CLOB1
AccessioniPrimary (citable) accession number: A7FX01
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: September 11, 2007
Last modified: December 9, 2015
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.