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A7FF74 (A7FF74_YERP3) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Beta-galactosidase PIRNR PIRNR001084
Short name=Beta-gal PIRNR PIRNR001084
EC=3.2.1.23 PIRNR PIRNR001084
Gene names
Ordered Locus Names:YpsIP31758_0918
OrganismYersinia pseudotuberculosis serotype O:1b (strain IP 31758) [Complete proteome] [HAMAP] EMBL ABS47957.1
Taxonomic identifier349747 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Yersinia

Protein attributes

Sequence length686 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. PIRNR PIRNR001084

Sequence similarities

Belongs to the glycosyl hydrolase 42 family. PIRNR PIRNR001084

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1571Proton donor By similarity PIRSR PIRSR001084-1
Active site3141Nucleophile By similarity PIRSR PIRSR001084-1
Metal binding1221Zinc By similarity PIRSR PIRSR001084-3
Metal binding1621Zinc By similarity PIRSR PIRSR001084-3
Metal binding1641Zinc By similarity PIRSR PIRSR001084-3
Metal binding1671Zinc By similarity PIRSR PIRSR001084-3
Binding site1181Substrate By similarity PIRSR PIRSR001084-2
Binding site1561Substrate By similarity PIRSR PIRSR001084-2
Binding site3221Substrate By similarity PIRSR PIRSR001084-2

Sequences

Sequence LengthMass (Da)Tools
A7FF74 [UniParc].

Last modified September 11, 2007. Version 1.
Checksum: CBDA4617C9775AB4

FASTA68678,165
        10         20         30         40         50         60 
MSKFPPLSAK VSALLHGADY NPEQWENYPD IIDKDIAMMK QAKCNVMSVG IFSWVKLEPS 

        70         80         90        100        110        120 
EGEYNFSWLD ELIEKLYAAG IHIFLATPSG ARPAWMSQKY PEVLRVGRDR VPALHGGRHN 

       130        140        150        160        170        180 
HCMTSPVYRQ KVRQINQKLA ERYAHHPAVI GWHISNEYGG ECHCHSCQQK FRLWLQDRYQ 

       190        200        210        220        230        240 
TLDNLNEAWW SAFWSHTYSD WSQIESPAPQ GEVSIHGLNL DWRRFNTAQV TEFCSEEAKP 

       250        260        270        280        290        300 
LKAANPELPV TTNFMEYFYD YDYWKLAQVI DFISWDSYPM WHREKDETQL ACYTAMYHDL 

       310        320        330        340        350        360 
MRTLKQGRPF VLMESTPSAT NWQPTSKLKK PGMHILSSLQ AVAHGADAVQ YFQWRKSRGS 

       370        380        390        400        410        420 
VEKFHGAVVD HVGHIDTRVG REVSELGRIL EAMSPVMGSK VDADVAIIFD WESRWAMDDA 

       430        440        450        460        470        480 
EGPRNCGLEY EKTVAEHYRP FWERGIAVDI INADCDLSGY KLVIAPMLYM VREGFAERAT 

       490        500        510        520        530        540 
RFVEQGGQFV ATYWSGIVNE SDLCHLGGFP GPLRPLLGIW SEEIDCLADG ESNQVQGLAG 

       550        560        570        580        590        600 
NKAGLQGPYQ AIHLCDLIHL EGATAVARYR DDFYADRAAV TVNFVGEGKA WYVASRNDAA 

       610        620        630        640        650        660 
FQRDFFMNIA EELNLARALD TQFPYGVTAH RRTDGESEFI VVENYSNDSK SLVLPAVYRD 

       670        680 
MVDQQPVQGS LTLAPWGSRV LTRYLE

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References

[1]"The complete genome sequence of Yersinia pseudotuberculosis IP31758, the causative agent of Far East scarlet-like fever."
Eppinger M., Rosovitz M.J., Fricke W.F., Rasko D.A., Kokorina G., Fayolle C., Lindler L.E., Carniel E., Ravel J.
PLoS Genet. 3:1508-1523(2007) [PubMed: 17784789] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000720 Genomic DNA. Translation: ABS47957.1.
RefSeqYP_001399902.1. NC_009708.1.

3D structure databases

ProteinModelPortalA7FF74.
ModBaseSearch...

Protein-protein interaction databases

STRINGA7FF74.

Protein family/group databases

CAZyGH42. Glycoside Hydrolase Family 42.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5385494.
GenomeReviewsGene locus YpsIP31758_0918 in contig CP000720_GR.
KEGGypi:YpsIP31758_0918.
PATRIC18630480. VBIYerPse15693_1204.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1874.
HOGENOMHBG476453.
OMAHGSDTVQ.
ProtClustDBCLSK888649.

Enzyme and pathway databases

BioCycYPSE349747:YPSIP31758_0918-MONOMER.

Family and domain databases

InterProIPR013739. Beta_galactosidase_C.
IPR013738. Beta_galactosidase_Trimer.
IPR003476. Glyco_hydro_42.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KOK12308.
PfamPF02449. Glyco_hydro_42. 1 hit.
PF08533. Glyco_hydro_42C. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view]
PIRSFPIRSF001084. B-galactosidase. 1 hit.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA7FF74_YERP3
AccessionPrimary (citable) accession number: A7FF74
Entry history
Integrated into UniProtKB/TrEMBL: September 11, 2007
Last sequence update: September 11, 2007
Last modified: January 25, 2012
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info