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A7F7Y3

- A7F7Y3_SCLS1

UniProt

A7F7Y3 - A7F7Y3_SCLS1

Protein

DNA ligase

Gene

SS1G_13713

Organism
Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 45 (01 Oct 2014)
      Sequence version 1 (11 Sep 2007)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: UniProtKB-KW
    3. DNA replication Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseUniRule annotation

    Keywords - Biological processi

    DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
    Gene namesi
    ORF Names:SS1G_13713Imported
    OrganismiSclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)Imported
    Taxonomic identifieri665079 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaLeotiomycetesHelotialesSclerotiniaceaeSclerotinia
    ProteomesiUP000001312: Unassembled WGS sequence

    Interactioni

    Protein-protein interaction databases

    STRINGi665079.A7F7Y3.

    Structurei

    3D structure databases

    ProteinModelPortaliA7F7Y3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ATP-dependent DNA ligase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1793.
    KOiK10747.
    OMAiMVKMLEG.
    OrthoDBiEOG7TXKRG.

    Family and domain databases

    Gene3Di1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProiIPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 2 hits.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR00574. dnl1. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A7F7Y3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPPKQATLGK FFGQPKGAPA KQSKLSFSSK SNSTKPPTSS SSASEENQDV    50
    EMKDGESDVD TTDTVKKEEG SDAKEKVKKE NVKQEKGVKR SRSPSPKLSA 100
    KTKAIKLDEE VKEEEDEDDD EEPIVKKPRR AENAQAKERK PSPKTIAKKP 150
    KTKSEPESSP KEDASKNLSP TAKRGRKAKG VEEGDEDEIE KTAQSPKLAK 200
    RRDSIVSKSA SESEIEEDLE SSGDEKPEVA AKAREKIQTT LKSKGKDPYP 250
    DWKAGEPVPY AALCTTFSLV EMTTKRLIIT AHCSLFLRQV LRLTPDDLLS 300
    TVLLMINKLA ADYAGIELGI GESLIMKAIG ESTGRNLSVI KNDQKEIGDL 350
    GLVAVKSRSN QPVMFKPKPL TVRAVLKSLI DIATVQGNGA QGRKVDGIKK 400
    LLSAADAHSS GKVDITKDKG GASEAKYIVR FLEGKLRLGL AEKTVLVSLA 450
    QAMVCHEIEA KGSGKVPSTE QLANGESILK AVHSYDVIIP AMLEHGIFSL 500
    KDNCKLQPGV PLKPMLAKPT KAITEVLDRF ENQTFTCEYK YDGERAQIHY 550
    VAKDSPKQYL GATPAAAKPS AGGLAAIFSR NSEDLSKKYP DILGKLNTWV 600
    KEDTKSFVLD CETVAWDMVE KKVLPFQQLM TRKKKDVKVE DVKVKVCVFA 650
    FDLLFLNGEA VVEKSLRERR ALLHEAFQPV EGEFQFATSM NGQEIDEIQT 700
    FLDESVKASC EGLMVKMLDG TESGYEPSKR SRNWLKIKKD YLSGIGDSLD 750
    LVVLGAYYGR GKRTSVYGAF LLACHNPHTD TYETICNIGT GFSEQVLEEL 800
    HAQLSAIVID RPKPFYSHSS GNQHQPDVWF EPKYVWEVKT ADLTLSPRYK 850
    AGCKEGVDKG GEKGISLRFP RFIKIRDDKK PDMATSSRQV AEMYRKQESV 900
    TKSKGSSVDD DFEY 914
    Length:914
    Mass (Da):100,893
    Last modified:September 11, 2007 - v1
    Checksum:iBA4FE0E3E529F100
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH476646 Genomic DNA. Translation: EDN98854.1.
    RefSeqiXP_001585474.1. XM_001585424.1.

    Genome annotation databases

    GeneIDi5481415.
    KEGGissl:SS1G_13713.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH476646 Genomic DNA. Translation: EDN98854.1 .
    RefSeqi XP_001585474.1. XM_001585424.1.

    3D structure databases

    ProteinModelPortali A7F7Y3.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 665079.A7F7Y3.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 5481415.
    KEGGi ssl:SS1G_13713.

    Phylogenomic databases

    eggNOGi COG1793.
    KOi K10747.
    OMAi MVKMLEG.
    OrthoDBi EOG7TXKRG.

    Family and domain databases

    Gene3Di 1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProi IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 2 hits.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR00574. dnl1. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea."
      Amselem J., Cuomo C.A., van Kan J.A.L., Viaud M., Benito E.P., Couloux A., Coutinho P.M., de Vries R.P., Dyer P.S., Fillinger S., Fournier E., Gout L., Hahn M., Kohn L., Lapalu N., Plummer K.M., Pradier J.-M., Quevillon E.
      , Sharon A., Simon A., ten Have A., Tudzynski B., Tudzynski P., Wincker P., Andrew M., Anthouard V., Beever R.E., Beffa R., Benoit I., Bouzid O., Brault B., Chen Z., Choquer M., Collemare J., Cotton P., Danchin E.G., Da Silva C., Gautier A., Giraud C., Giraud T., Gonzalez C., Grossetete S., Gueldener U., Henrissat B., Howlett B.J., Kodira C., Kretschmer M., Lappartient A., Leroch M., Levis C., Mauceli E., Neuveglise C., Oeser B., Pearson M., Poulain J., Poussereau N., Quesneville H., Rascle C., Schumacher J., Segurens B., Sexton A., Silva E., Sirven C., Soanes D.M., Talbot N.J., Templeton M., Yandava C., Yarden O., Zeng Q., Rollins J.A., Lebrun M.-H., Dickman M.
      PLoS Genet. 7:E1002230-E1002230(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 18683 / 1980 / Ss-1Imported.

    Entry informationi

    Entry nameiA7F7Y3_SCLS1
    AccessioniPrimary (citable) accession number: A7F7Y3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 11, 2007
    Last sequence update: September 11, 2007
    Last modified: October 1, 2014
    This is version 45 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3