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A7F7Y3

- A7F7Y3_SCLS1

UniProt

A7F7Y3 - A7F7Y3_SCLS1

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Protein
DNA ligase
Gene
SS1G_13713
Organism
Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: UniProtKB-KW
  3. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotation

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:SS1G_13713Imported
OrganismiSclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)
Taxonomic identifieri665079 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaLeotiomycetesHelotialesSclerotiniaceaeSclerotinia
ProteomesiUP000001312: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi665079.A7F7Y3.

Structurei

3D structure databases

ProteinModelPortaliA7F7Y3.

Family & Domainsi

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1793.
KOiK10747.
OMAiMVKMLEG.
OrthoDBiEOG7TXKRG.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 2 hits.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A7F7Y3-1 [UniParc]FASTAAdd to Basket

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MPPKQATLGK FFGQPKGAPA KQSKLSFSSK SNSTKPPTSS SSASEENQDV    50
EMKDGESDVD TTDTVKKEEG SDAKEKVKKE NVKQEKGVKR SRSPSPKLSA 100
KTKAIKLDEE VKEEEDEDDD EEPIVKKPRR AENAQAKERK PSPKTIAKKP 150
KTKSEPESSP KEDASKNLSP TAKRGRKAKG VEEGDEDEIE KTAQSPKLAK 200
RRDSIVSKSA SESEIEEDLE SSGDEKPEVA AKAREKIQTT LKSKGKDPYP 250
DWKAGEPVPY AALCTTFSLV EMTTKRLIIT AHCSLFLRQV LRLTPDDLLS 300
TVLLMINKLA ADYAGIELGI GESLIMKAIG ESTGRNLSVI KNDQKEIGDL 350
GLVAVKSRSN QPVMFKPKPL TVRAVLKSLI DIATVQGNGA QGRKVDGIKK 400
LLSAADAHSS GKVDITKDKG GASEAKYIVR FLEGKLRLGL AEKTVLVSLA 450
QAMVCHEIEA KGSGKVPSTE QLANGESILK AVHSYDVIIP AMLEHGIFSL 500
KDNCKLQPGV PLKPMLAKPT KAITEVLDRF ENQTFTCEYK YDGERAQIHY 550
VAKDSPKQYL GATPAAAKPS AGGLAAIFSR NSEDLSKKYP DILGKLNTWV 600
KEDTKSFVLD CETVAWDMVE KKVLPFQQLM TRKKKDVKVE DVKVKVCVFA 650
FDLLFLNGEA VVEKSLRERR ALLHEAFQPV EGEFQFATSM NGQEIDEIQT 700
FLDESVKASC EGLMVKMLDG TESGYEPSKR SRNWLKIKKD YLSGIGDSLD 750
LVVLGAYYGR GKRTSVYGAF LLACHNPHTD TYETICNIGT GFSEQVLEEL 800
HAQLSAIVID RPKPFYSHSS GNQHQPDVWF EPKYVWEVKT ADLTLSPRYK 850
AGCKEGVDKG GEKGISLRFP RFIKIRDDKK PDMATSSRQV AEMYRKQESV 900
TKSKGSSVDD DFEY 914
Length:914
Mass (Da):100,893
Last modified:September 11, 2007 - v1
Checksum:iBA4FE0E3E529F100
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CH476646 Genomic DNA. Translation: EDN98854.1.
RefSeqiXP_001585474.1. XM_001585424.1.

Genome annotation databases

GeneIDi5481415.
KEGGissl:SS1G_13713.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CH476646 Genomic DNA. Translation: EDN98854.1 .
RefSeqi XP_001585474.1. XM_001585424.1.

3D structure databases

ProteinModelPortali A7F7Y3.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 665079.A7F7Y3.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 5481415.
KEGGi ssl:SS1G_13713.

Phylogenomic databases

eggNOGi COG1793.
KOi K10747.
OMAi MVKMLEG.
OrthoDBi EOG7TXKRG.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProi IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 2 hits.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea."
    Amselem J., Cuomo C.A., van Kan J.A.L., Viaud M., Benito E.P., Couloux A., Coutinho P.M., de Vries R.P., Dyer P.S., Fillinger S., Fournier E., Gout L., Hahn M., Kohn L., Lapalu N., Plummer K.M., Pradier J.-M., Quevillon E.
    , Sharon A., Simon A., ten Have A., Tudzynski B., Tudzynski P., Wincker P., Andrew M., Anthouard V., Beever R.E., Beffa R., Benoit I., Bouzid O., Brault B., Chen Z., Choquer M., Collemare J., Cotton P., Danchin E.G., Da Silva C., Gautier A., Giraud C., Giraud T., Gonzalez C., Grossetete S., Gueldener U., Henrissat B., Howlett B.J., Kodira C., Kretschmer M., Lappartient A., Leroch M., Levis C., Mauceli E., Neuveglise C., Oeser B., Pearson M., Poulain J., Poussereau N., Quesneville H., Rascle C., Schumacher J., Segurens B., Sexton A., Silva E., Sirven C., Soanes D.M., Talbot N.J., Templeton M., Yandava C., Yarden O., Zeng Q., Rollins J.A., Lebrun M.-H., Dickman M.
    PLoS Genet. 7:E1002230-E1002230(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 18683 / 1980 / Ss-1.

Entry informationi

Entry nameiA7F7Y3_SCLS1
AccessioniPrimary (citable) accession number: A7F7Y3
Entry historyi
Integrated into UniProtKB/TrEMBL: September 11, 2007
Last sequence update: September 11, 2007
Last modified: May 14, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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