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A7F7Y3

- A7F7Y3_SCLS1

UniProt

A7F7Y3 - A7F7Y3_SCLS1

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Protein

DNA ligase

Gene

SS1G_13713

Organism
Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA biosynthetic process Source: InterPro
  2. DNA ligation involved in DNA repair Source: InterPro
  3. DNA recombination Source: UniProtKB-KW
  4. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotation

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:SS1G_13713Imported
OrganismiSclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)Imported
Taxonomic identifieri665079 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaLeotiomycetesHelotialesSclerotiniaceaeSclerotinia
ProteomesiUP000001312: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi665079.A7F7Y3.

Structurei

3D structure databases

ProteinModelPortaliA7F7Y3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1793.
InParanoidiA7F7Y3.
KOiK10747.
OMAiMVKMLEG.
OrthoDBiEOG7TXKRG.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 2 hits.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A7F7Y3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPPKQATLGK FFGQPKGAPA KQSKLSFSSK SNSTKPPTSS SSASEENQDV
60 70 80 90 100
EMKDGESDVD TTDTVKKEEG SDAKEKVKKE NVKQEKGVKR SRSPSPKLSA
110 120 130 140 150
KTKAIKLDEE VKEEEDEDDD EEPIVKKPRR AENAQAKERK PSPKTIAKKP
160 170 180 190 200
KTKSEPESSP KEDASKNLSP TAKRGRKAKG VEEGDEDEIE KTAQSPKLAK
210 220 230 240 250
RRDSIVSKSA SESEIEEDLE SSGDEKPEVA AKAREKIQTT LKSKGKDPYP
260 270 280 290 300
DWKAGEPVPY AALCTTFSLV EMTTKRLIIT AHCSLFLRQV LRLTPDDLLS
310 320 330 340 350
TVLLMINKLA ADYAGIELGI GESLIMKAIG ESTGRNLSVI KNDQKEIGDL
360 370 380 390 400
GLVAVKSRSN QPVMFKPKPL TVRAVLKSLI DIATVQGNGA QGRKVDGIKK
410 420 430 440 450
LLSAADAHSS GKVDITKDKG GASEAKYIVR FLEGKLRLGL AEKTVLVSLA
460 470 480 490 500
QAMVCHEIEA KGSGKVPSTE QLANGESILK AVHSYDVIIP AMLEHGIFSL
510 520 530 540 550
KDNCKLQPGV PLKPMLAKPT KAITEVLDRF ENQTFTCEYK YDGERAQIHY
560 570 580 590 600
VAKDSPKQYL GATPAAAKPS AGGLAAIFSR NSEDLSKKYP DILGKLNTWV
610 620 630 640 650
KEDTKSFVLD CETVAWDMVE KKVLPFQQLM TRKKKDVKVE DVKVKVCVFA
660 670 680 690 700
FDLLFLNGEA VVEKSLRERR ALLHEAFQPV EGEFQFATSM NGQEIDEIQT
710 720 730 740 750
FLDESVKASC EGLMVKMLDG TESGYEPSKR SRNWLKIKKD YLSGIGDSLD
760 770 780 790 800
LVVLGAYYGR GKRTSVYGAF LLACHNPHTD TYETICNIGT GFSEQVLEEL
810 820 830 840 850
HAQLSAIVID RPKPFYSHSS GNQHQPDVWF EPKYVWEVKT ADLTLSPRYK
860 870 880 890 900
AGCKEGVDKG GEKGISLRFP RFIKIRDDKK PDMATSSRQV AEMYRKQESV
910
TKSKGSSVDD DFEY
Length:914
Mass (Da):100,893
Last modified:September 11, 2007 - v1
Checksum:iBA4FE0E3E529F100
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CH476646 Genomic DNA. Translation: EDN98854.1.
RefSeqiXP_001585474.1. XM_001585424.1.

Genome annotation databases

GeneIDi5481415.
KEGGissl:SS1G_13713.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CH476646 Genomic DNA. Translation: EDN98854.1 .
RefSeqi XP_001585474.1. XM_001585424.1.

3D structure databases

ProteinModelPortali A7F7Y3.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 665079.A7F7Y3.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 5481415.
KEGGi ssl:SS1G_13713.

Phylogenomic databases

eggNOGi COG1793.
InParanoidi A7F7Y3.
KOi K10747.
OMAi MVKMLEG.
OrthoDBi EOG7TXKRG.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProi IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 2 hits.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea."
    Amselem J., Cuomo C.A., van Kan J.A.L., Viaud M., Benito E.P., Couloux A., Coutinho P.M., de Vries R.P., Dyer P.S., Fillinger S., Fournier E., Gout L., Hahn M., Kohn L., Lapalu N., Plummer K.M., Pradier J.-M., Quevillon E.
    , Sharon A., Simon A., ten Have A., Tudzynski B., Tudzynski P., Wincker P., Andrew M., Anthouard V., Beever R.E., Beffa R., Benoit I., Bouzid O., Brault B., Chen Z., Choquer M., Collemare J., Cotton P., Danchin E.G., Da Silva C., Gautier A., Giraud C., Giraud T., Gonzalez C., Grossetete S., Gueldener U., Henrissat B., Howlett B.J., Kodira C., Kretschmer M., Lappartient A., Leroch M., Levis C., Mauceli E., Neuveglise C., Oeser B., Pearson M., Poulain J., Poussereau N., Quesneville H., Rascle C., Schumacher J., Segurens B., Sexton A., Silva E., Sirven C., Soanes D.M., Talbot N.J., Templeton M., Yandava C., Yarden O., Zeng Q., Rollins J.A., Lebrun M.-H., Dickman M.
    PLoS Genet. 7:E1002230-E1002230(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 18683 / 1980 / Ss-1Imported.

Entry informationi

Entry nameiA7F7Y3_SCLS1
AccessioniPrimary (citable) accession number: A7F7Y3
Entry historyi
Integrated into UniProtKB/TrEMBL: September 11, 2007
Last sequence update: September 11, 2007
Last modified: October 29, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3