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Protein

DNA ligase

Gene

SS1G_13713

Organism
Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n)-3'-hydroxyl + 5'-phospho-(deoxyribonucleotide)(m) = (deoxyribonucleotide)(n+m) + AMP + diphosphate.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseUniRule annotation
Biological processDNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation
LigandATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:SS1G_13713Imported
OrganismiSclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)Imported
Taxonomic identifieri665079 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaLeotiomycetesHelotialesSclerotiniaceaeSclerotinia
Proteomesi
  • UP000001312 Componenti: Unassembled WGS sequence

Organism-specific databases

EuPathDBiFungiDB:SS1G_13713

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Structurei

3D structure databases

ProteinModelPortaliA7F7Y3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini639 – 776DNA_LIGASE_A3InterPro annotationAdd BLAST138

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili97 – 117Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

InParanoidiA7F7Y3
KOiK10747
OMAiWIKYKRD
OrthoDBiEOG092C0FHN

Family and domain databases

Gene3Di1.10.3260.10, 1 hit
InterProiView protein in InterPro
IPR000977 DNA_ligase_ATP-dep
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR016059 DNA_ligase_ATP-dep_CS
IPR012308 DNA_ligase_ATP-dep_N
IPR036599 DNA_ligase_N_sf
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 2 hits
PF04675 DNA_ligase_A_N, 1 hit
SUPFAMiSSF117018 SSF117018, 1 hit
SSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00574 dnl1, 1 hit
PROSITEiView protein in PROSITE
PS00697 DNA_LIGASE_A1, 1 hit
PS00333 DNA_LIGASE_A2, 1 hit
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

A7F7Y3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPPKQATLGK FFGQPKGAPA KQSKLSFSSK SNSTKPPTSS SSASEENQDV
60 70 80 90 100
EMKDGESDVD TTDTVKKEEG SDAKEKVKKE NVKQEKGVKR SRSPSPKLSA
110 120 130 140 150
KTKAIKLDEE VKEEEDEDDD EEPIVKKPRR AENAQAKERK PSPKTIAKKP
160 170 180 190 200
KTKSEPESSP KEDASKNLSP TAKRGRKAKG VEEGDEDEIE KTAQSPKLAK
210 220 230 240 250
RRDSIVSKSA SESEIEEDLE SSGDEKPEVA AKAREKIQTT LKSKGKDPYP
260 270 280 290 300
DWKAGEPVPY AALCTTFSLV EMTTKRLIIT AHCSLFLRQV LRLTPDDLLS
310 320 330 340 350
TVLLMINKLA ADYAGIELGI GESLIMKAIG ESTGRNLSVI KNDQKEIGDL
360 370 380 390 400
GLVAVKSRSN QPVMFKPKPL TVRAVLKSLI DIATVQGNGA QGRKVDGIKK
410 420 430 440 450
LLSAADAHSS GKVDITKDKG GASEAKYIVR FLEGKLRLGL AEKTVLVSLA
460 470 480 490 500
QAMVCHEIEA KGSGKVPSTE QLANGESILK AVHSYDVIIP AMLEHGIFSL
510 520 530 540 550
KDNCKLQPGV PLKPMLAKPT KAITEVLDRF ENQTFTCEYK YDGERAQIHY
560 570 580 590 600
VAKDSPKQYL GATPAAAKPS AGGLAAIFSR NSEDLSKKYP DILGKLNTWV
610 620 630 640 650
KEDTKSFVLD CETVAWDMVE KKVLPFQQLM TRKKKDVKVE DVKVKVCVFA
660 670 680 690 700
FDLLFLNGEA VVEKSLRERR ALLHEAFQPV EGEFQFATSM NGQEIDEIQT
710 720 730 740 750
FLDESVKASC EGLMVKMLDG TESGYEPSKR SRNWLKIKKD YLSGIGDSLD
760 770 780 790 800
LVVLGAYYGR GKRTSVYGAF LLACHNPHTD TYETICNIGT GFSEQVLEEL
810 820 830 840 850
HAQLSAIVID RPKPFYSHSS GNQHQPDVWF EPKYVWEVKT ADLTLSPRYK
860 870 880 890 900
AGCKEGVDKG GEKGISLRFP RFIKIRDDKK PDMATSSRQV AEMYRKQESV
910
TKSKGSSVDD DFEY
Length:914
Mass (Da):100,893
Last modified:September 11, 2007 - v1
Checksum:iBA4FE0E3E529F100
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH476646 Genomic DNA Translation: EDN98854.1
RefSeqiXP_001585474.1, XM_001585424.1

Genome annotation databases

GeneIDi5481415
KEGGissl:SS1G_13713

Similar proteinsi

Entry informationi

Entry nameiA7F7Y3_SCLS1
AccessioniPrimary (citable) accession number: A7F7Y3
Entry historyiIntegrated into UniProtKB/TrEMBL: September 11, 2007
Last sequence update: September 11, 2007
Last modified: March 28, 2018
This is version 67 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health