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A7F0C2

- A7F0C2_SCLS1

UniProt

A7F0C2 - A7F0C2_SCLS1

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Protein

DNA ligase

Gene
SS1G_11039
Organism
Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: UniProtKB-KW
  3. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotation

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:SS1G_11039Imported
OrganismiSclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)
Taxonomic identifieri665079 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaLeotiomycetesHelotialesSclerotiniaceaeSclerotinia
ProteomesiUP000001312: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi665079.A7F0C2.

Structurei

3D structure databases

ProteinModelPortaliA7F0C2.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG1793.
KOiK10747.
OMAiFIMEGEV.
OrthoDBiEOG7TXKRG.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A7F0C2-1 [UniParc]FASTAAdd to Basket

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MGTPTKRRKL NNDTKSNGSR NLDFFFGKRK KEEQELPSQL VGSPSQDVPD    50
GAGPSELTDE QLARKLQEEW DREPVGTNEA TEGFLVETNR QPSATPVSAI 100
STSHTSEKAP SDGIFSRPTT KPTKPIINKN TLSLQSAGTA EDTISTQSRI 150
KIVDTLVNLL RVIIEGDPDS LLHTVWLATN AISPPYISLE LGLGGSAISK 200
ALKNVCGLDS RSLKTLYNKH GDAGDVAFEA KKRQSFTLRK PKPLTIKGVY 250
QSLVKIAKTQ GTGSSEIKQR IVDRLLQDAR GAEESRYIVR TLCQHLRIGA 300
VKTTMLIALS RAFQLSRPPG ADFPLKSQQE LVKLKKEVLA ELWSKGEEIV 350
KACFAKRPNY NDLIPILLEI GVCEELLVRC GLALHIPLRP MLGSITRDLA 400
EMLTKLQGRD FSCEYKYDGQ RAQVHCDENG KVSIFSRHLE LMTDKYPDLV 450
ALIPKIRGEG VESFIMEGEV VSVDRQSGDL KTFQSLANRA RKDVAIGSVT 500
IDVCLFSFDL MYLNGESLLN RTFRERRELL RGLFVEVPNQ FTWVKSIDAT 550
SQDSEVVLEF FNTAIERKCE GIMVKILDDL PSTTLLESEE VSEEIEPSIL 600
QTSQKQSRGK TKSAEKEPEK KTRRKALLST YEPDKRLDSW LKVKKDYSAS 650
FDTLDLIPVA AWHGQGRKAK FWSPILLAVR NDETGTLEAV CKCISGFSDA 700
FYKVNKEFYA EGGEHVLGGK PNYVDYRGGH PDVWFEPQEV WEMAYADITI 750
SPVYRAAIGL VSDEKGLSLR FPRFLKKRED KSIEEASTSE FLAGLWRKQE 800
QKVDDGKEKS EEIYLEDDEE 820
Length:820
Mass (Da):91,914
Last modified:September 11, 2007 - v1
Checksum:i3E0D7380E1374946
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CH476637 Genomic DNA. Translation: EDN95164.1.
RefSeqiXP_001587799.1. XM_001587749.1.

Genome annotation databases

EnsemblFungiiEDN95164; EDN95164; SS1G_11039.
GeneIDi5483850.
KEGGissl:SS1G_11039.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CH476637 Genomic DNA. Translation: EDN95164.1 .
RefSeqi XP_001587799.1. XM_001587749.1.

3D structure databases

ProteinModelPortali A7F0C2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 665079.A7F0C2.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii EDN95164 ; EDN95164 ; SS1G_11039 .
GeneIDi 5483850.
KEGGi ssl:SS1G_11039.

Phylogenomic databases

eggNOGi COG1793.
KOi K10747.
OMAi FIMEGEV.
OrthoDBi EOG7TXKRG.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProi IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea."
    Amselem J., Cuomo C.A., van Kan J.A.L., Viaud M., Benito E.P., Couloux A., Coutinho P.M., de Vries R.P., Dyer P.S., Fillinger S., Fournier E., Gout L., Hahn M., Kohn L., Lapalu N., Plummer K.M., Pradier J.-M., Quevillon E.
    , Sharon A., Simon A., ten Have A., Tudzynski B., Tudzynski P., Wincker P., Andrew M., Anthouard V., Beever R.E., Beffa R., Benoit I., Bouzid O., Brault B., Chen Z., Choquer M., Collemare J., Cotton P., Danchin E.G., Da Silva C., Gautier A., Giraud C., Giraud T., Gonzalez C., Grossetete S., Gueldener U., Henrissat B., Howlett B.J., Kodira C., Kretschmer M., Lappartient A., Leroch M., Levis C., Mauceli E., Neuveglise C., Oeser B., Pearson M., Poulain J., Poussereau N., Quesneville H., Rascle C., Schumacher J., Segurens B., Sexton A., Silva E., Sirven C., Soanes D.M., Talbot N.J., Templeton M., Yandava C., Yarden O., Zeng Q., Rollins J.A., Lebrun M.-H., Dickman M.
    PLoS Genet. 7:E1002230-E1002230(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 18683 / 1980 / Ss-1.

Entry informationi

Entry nameiA7F0C2_SCLS1
AccessioniPrimary (citable) accession number: A7F0C2
Entry historyi
Integrated into UniProtKB/TrEMBL: September 11, 2007
Last sequence update: September 11, 2007
Last modified: November 13, 2013
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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