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A7F0C2

- A7F0C2_SCLS1

UniProt

A7F0C2 - A7F0C2_SCLS1

Protein

DNA ligase

Gene

SS1G_11039

Organism
Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 45 (01 Oct 2014)
      Sequence version 1 (11 Sep 2007)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: UniProtKB-KW
    3. DNA replication Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseUniRule annotation

    Keywords - Biological processi

    DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
    Gene namesi
    ORF Names:SS1G_11039Imported
    OrganismiSclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)Imported
    Taxonomic identifieri665079 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaLeotiomycetesHelotialesSclerotiniaceaeSclerotinia
    ProteomesiUP000001312: Unassembled WGS sequence

    Interactioni

    Protein-protein interaction databases

    STRINGi665079.A7F0C2.

    Structurei

    3D structure databases

    ProteinModelPortaliA7F0C2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiCOG1793.
    KOiK10747.
    OMAiFIMEGEV.
    OrthoDBiEOG7TXKRG.

    Family and domain databases

    Gene3Di1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProiIPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR00574. dnl1. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A7F0C2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGTPTKRRKL NNDTKSNGSR NLDFFFGKRK KEEQELPSQL VGSPSQDVPD    50
    GAGPSELTDE QLARKLQEEW DREPVGTNEA TEGFLVETNR QPSATPVSAI 100
    STSHTSEKAP SDGIFSRPTT KPTKPIINKN TLSLQSAGTA EDTISTQSRI 150
    KIVDTLVNLL RVIIEGDPDS LLHTVWLATN AISPPYISLE LGLGGSAISK 200
    ALKNVCGLDS RSLKTLYNKH GDAGDVAFEA KKRQSFTLRK PKPLTIKGVY 250
    QSLVKIAKTQ GTGSSEIKQR IVDRLLQDAR GAEESRYIVR TLCQHLRIGA 300
    VKTTMLIALS RAFQLSRPPG ADFPLKSQQE LVKLKKEVLA ELWSKGEEIV 350
    KACFAKRPNY NDLIPILLEI GVCEELLVRC GLALHIPLRP MLGSITRDLA 400
    EMLTKLQGRD FSCEYKYDGQ RAQVHCDENG KVSIFSRHLE LMTDKYPDLV 450
    ALIPKIRGEG VESFIMEGEV VSVDRQSGDL KTFQSLANRA RKDVAIGSVT 500
    IDVCLFSFDL MYLNGESLLN RTFRERRELL RGLFVEVPNQ FTWVKSIDAT 550
    SQDSEVVLEF FNTAIERKCE GIMVKILDDL PSTTLLESEE VSEEIEPSIL 600
    QTSQKQSRGK TKSAEKEPEK KTRRKALLST YEPDKRLDSW LKVKKDYSAS 650
    FDTLDLIPVA AWHGQGRKAK FWSPILLAVR NDETGTLEAV CKCISGFSDA 700
    FYKVNKEFYA EGGEHVLGGK PNYVDYRGGH PDVWFEPQEV WEMAYADITI 750
    SPVYRAAIGL VSDEKGLSLR FPRFLKKRED KSIEEASTSE FLAGLWRKQE 800
    QKVDDGKEKS EEIYLEDDEE 820
    Length:820
    Mass (Da):91,914
    Last modified:September 11, 2007 - v1
    Checksum:i3E0D7380E1374946
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH476637 Genomic DNA. Translation: EDN95164.1.
    RefSeqiXP_001587799.1. XM_001587749.1.

    Genome annotation databases

    EnsemblFungiiEDN95164; EDN95164; SS1G_11039.
    GeneIDi5483850.
    KEGGissl:SS1G_11039.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH476637 Genomic DNA. Translation: EDN95164.1 .
    RefSeqi XP_001587799.1. XM_001587749.1.

    3D structure databases

    ProteinModelPortali A7F0C2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 665079.A7F0C2.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii EDN95164 ; EDN95164 ; SS1G_11039 .
    GeneIDi 5483850.
    KEGGi ssl:SS1G_11039.

    Phylogenomic databases

    eggNOGi COG1793.
    KOi K10747.
    OMAi FIMEGEV.
    OrthoDBi EOG7TXKRG.

    Family and domain databases

    Gene3Di 1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProi IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR00574. dnl1. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea."
      Amselem J., Cuomo C.A., van Kan J.A.L., Viaud M., Benito E.P., Couloux A., Coutinho P.M., de Vries R.P., Dyer P.S., Fillinger S., Fournier E., Gout L., Hahn M., Kohn L., Lapalu N., Plummer K.M., Pradier J.-M., Quevillon E.
      , Sharon A., Simon A., ten Have A., Tudzynski B., Tudzynski P., Wincker P., Andrew M., Anthouard V., Beever R.E., Beffa R., Benoit I., Bouzid O., Brault B., Chen Z., Choquer M., Collemare J., Cotton P., Danchin E.G., Da Silva C., Gautier A., Giraud C., Giraud T., Gonzalez C., Grossetete S., Gueldener U., Henrissat B., Howlett B.J., Kodira C., Kretschmer M., Lappartient A., Leroch M., Levis C., Mauceli E., Neuveglise C., Oeser B., Pearson M., Poulain J., Poussereau N., Quesneville H., Rascle C., Schumacher J., Segurens B., Sexton A., Silva E., Sirven C., Soanes D.M., Talbot N.J., Templeton M., Yandava C., Yarden O., Zeng Q., Rollins J.A., Lebrun M.-H., Dickman M.
      PLoS Genet. 7:E1002230-E1002230(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 18683 / 1980 / Ss-1Imported.

    Entry informationi

    Entry nameiA7F0C2_SCLS1
    AccessioniPrimary (citable) accession number: A7F0C2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 11, 2007
    Last sequence update: September 11, 2007
    Last modified: October 1, 2014
    This is version 45 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3