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A7F0C2

- A7F0C2_SCLS1

UniProt

A7F0C2 - A7F0C2_SCLS1

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Protein

DNA ligase

Gene

SS1G_11039

Organism
Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA biosynthetic process Source: InterPro
  2. DNA ligation involved in DNA repair Source: InterPro
  3. DNA recombination Source: UniProtKB-KW
  4. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotation

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:SS1G_11039Imported
OrganismiSclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)Imported
Taxonomic identifieri665079 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaLeotiomycetesHelotialesSclerotiniaceaeSclerotinia
ProteomesiUP000001312: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi665079.A7F0C2.

Structurei

3D structure databases

ProteinModelPortaliA7F0C2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1793.
InParanoidiA7F0C2.
KOiK10747.
OMAiFIMEGEV.
OrthoDBiEOG7TXKRG.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A7F0C2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGTPTKRRKL NNDTKSNGSR NLDFFFGKRK KEEQELPSQL VGSPSQDVPD
60 70 80 90 100
GAGPSELTDE QLARKLQEEW DREPVGTNEA TEGFLVETNR QPSATPVSAI
110 120 130 140 150
STSHTSEKAP SDGIFSRPTT KPTKPIINKN TLSLQSAGTA EDTISTQSRI
160 170 180 190 200
KIVDTLVNLL RVIIEGDPDS LLHTVWLATN AISPPYISLE LGLGGSAISK
210 220 230 240 250
ALKNVCGLDS RSLKTLYNKH GDAGDVAFEA KKRQSFTLRK PKPLTIKGVY
260 270 280 290 300
QSLVKIAKTQ GTGSSEIKQR IVDRLLQDAR GAEESRYIVR TLCQHLRIGA
310 320 330 340 350
VKTTMLIALS RAFQLSRPPG ADFPLKSQQE LVKLKKEVLA ELWSKGEEIV
360 370 380 390 400
KACFAKRPNY NDLIPILLEI GVCEELLVRC GLALHIPLRP MLGSITRDLA
410 420 430 440 450
EMLTKLQGRD FSCEYKYDGQ RAQVHCDENG KVSIFSRHLE LMTDKYPDLV
460 470 480 490 500
ALIPKIRGEG VESFIMEGEV VSVDRQSGDL KTFQSLANRA RKDVAIGSVT
510 520 530 540 550
IDVCLFSFDL MYLNGESLLN RTFRERRELL RGLFVEVPNQ FTWVKSIDAT
560 570 580 590 600
SQDSEVVLEF FNTAIERKCE GIMVKILDDL PSTTLLESEE VSEEIEPSIL
610 620 630 640 650
QTSQKQSRGK TKSAEKEPEK KTRRKALLST YEPDKRLDSW LKVKKDYSAS
660 670 680 690 700
FDTLDLIPVA AWHGQGRKAK FWSPILLAVR NDETGTLEAV CKCISGFSDA
710 720 730 740 750
FYKVNKEFYA EGGEHVLGGK PNYVDYRGGH PDVWFEPQEV WEMAYADITI
760 770 780 790 800
SPVYRAAIGL VSDEKGLSLR FPRFLKKRED KSIEEASTSE FLAGLWRKQE
810 820
QKVDDGKEKS EEIYLEDDEE
Length:820
Mass (Da):91,914
Last modified:September 11, 2007 - v1
Checksum:i3E0D7380E1374946
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH476637 Genomic DNA. Translation: EDN95164.1.
RefSeqiXP_001587799.1. XM_001587749.1.

Genome annotation databases

EnsemblFungiiEDN95164; EDN95164; SS1G_11039.
GeneIDi5483850.
KEGGissl:SS1G_11039.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH476637 Genomic DNA. Translation: EDN95164.1 .
RefSeqi XP_001587799.1. XM_001587749.1.

3D structure databases

ProteinModelPortali A7F0C2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 665079.A7F0C2.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii EDN95164 ; EDN95164 ; SS1G_11039 .
GeneIDi 5483850.
KEGGi ssl:SS1G_11039.

Phylogenomic databases

eggNOGi COG1793.
InParanoidi A7F0C2.
KOi K10747.
OMAi FIMEGEV.
OrthoDBi EOG7TXKRG.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProi IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea."
    Amselem J., Cuomo C.A., van Kan J.A.L., Viaud M., Benito E.P., Couloux A., Coutinho P.M., de Vries R.P., Dyer P.S., Fillinger S., Fournier E., Gout L., Hahn M., Kohn L., Lapalu N., Plummer K.M., Pradier J.-M., Quevillon E.
    , Sharon A., Simon A., ten Have A., Tudzynski B., Tudzynski P., Wincker P., Andrew M., Anthouard V., Beever R.E., Beffa R., Benoit I., Bouzid O., Brault B., Chen Z., Choquer M., Collemare J., Cotton P., Danchin E.G., Da Silva C., Gautier A., Giraud C., Giraud T., Gonzalez C., Grossetete S., Gueldener U., Henrissat B., Howlett B.J., Kodira C., Kretschmer M., Lappartient A., Leroch M., Levis C., Mauceli E., Neuveglise C., Oeser B., Pearson M., Poulain J., Poussereau N., Quesneville H., Rascle C., Schumacher J., Segurens B., Sexton A., Silva E., Sirven C., Soanes D.M., Talbot N.J., Templeton M., Yandava C., Yarden O., Zeng Q., Rollins J.A., Lebrun M.-H., Dickman M.
    PLoS Genet. 7:E1002230-E1002230(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 18683 / 1980 / Ss-1Imported.

Entry informationi

Entry nameiA7F0C2_SCLS1
AccessioniPrimary (citable) accession number: A7F0C2
Entry historyi
Integrated into UniProtKB/TrEMBL: September 11, 2007
Last sequence update: September 11, 2007
Last modified: October 29, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3