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Protein

Glutamate decarboxylase

Gene

SS1G_05050

Organism
Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
ORF Names:SS1G_05050Imported
OrganismiSclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)Imported
Taxonomic identifieri665079 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaLeotiomycetesHelotialesSclerotiniaceaeSclerotinia
ProteomesiUP000001312 Componenti: Unassembled WGS sequence

Organism-specific databases

EuPathDBiFungiDB:SS1G_05050.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiA7EIA7.

Interactioni

Protein-protein interaction databases

STRINGi5180.EDO02573.

Structurei

3D structure databases

ProteinModelPortaliA7EIA7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
InParanoidiA7EIA7.
KOiK01580.
OMAiFLHLGFE.
OrthoDBiEOG7P2Z22.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 2 hits.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

A7EIA7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLARHVDPD EIVDSLQHMH MKEAGKKHLH TKGGTSHITP YSTRYASQQE
60 70 80 90 100
ISKFKIPQDG APADAVHQIL KDELDLDGRP NLNLASFVGT YMESHAEQLM
110 120 130 140 150
FENISKNMSD ADEYPAMMQM HARCVSIIAN LWGAQKGEKA IGSATTGSSE
160 170 180 190 200
AIHLGGLAMK RRWQEKRDAE GKDKSKPNII MGANAQVALE KFARYFEVEA
210 220 230 240 250
RILPVSEESN SRLDPNLVKE NIDENTIGIF VILGSTYTGH YEPVEEISKI
260 270 280 290 300
LDEYEAKTGI DIPIHVDAAS GGFVAPFTHA KAGGAKWNFE LPRVKSINVS
310 320 330 340 350
GHKFGLVYAG VGWIIWRDES YLPKHLIFEL HYLGGTETSY TLNFSRPGAQ
360 370 380 390 400
VIAQYYNLIH LGFNGYRQIM ENCLSNARLL SKSLEATGWY TCVSDIHRKK
410 420 430 440 450
GEHKAQGRSA AVFFTEDETS ADYNAGLPVV AFRFSDEFKK EFPHIKQESV
460 470 480 490 500
SNLLRAKQYI VPNYPLPPNE ENIEILRIVV RESMSFDLLD RLIADICSTT
510 520 530 540 550
QNLIDNDKQD LSMLNEHLSK GHGSVEKNHG SLGHRHGKGQ GKGGERPMSH

GVHRAVC
Length:557
Mass (Da):62,155
Last modified:September 11, 2007 - v1
Checksum:iC29D61D5DC6B9DFA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH476626 Genomic DNA. Translation: EDO02573.1.
RefSeqiXP_001593622.1. XM_001593572.1.

Genome annotation databases

EnsemblFungiiEDO02573; EDO02573; SS1G_05050.
GeneIDi5489673.
KEGGissl:SS1G_05050.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH476626 Genomic DNA. Translation: EDO02573.1.
RefSeqiXP_001593622.1. XM_001593572.1.

3D structure databases

ProteinModelPortaliA7EIA7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi5180.EDO02573.

Proteomic databases

PRIDEiA7EIA7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiEDO02573; EDO02573; SS1G_05050.
GeneIDi5489673.
KEGGissl:SS1G_05050.

Organism-specific databases

EuPathDBiFungiDB:SS1G_05050.

Phylogenomic databases

eggNOGiCOG0076.
InParanoidiA7EIA7.
KOiK01580.
OMAiFLHLGFE.
OrthoDBiEOG7P2Z22.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 2 hits.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea."
    Amselem J., Cuomo C.A., van Kan J.A.L., Viaud M., Benito E.P., Couloux A., Coutinho P.M., de Vries R.P., Dyer P.S., Fillinger S., Fournier E., Gout L., Hahn M., Kohn L., Lapalu N., Plummer K.M., Pradier J.-M., Quevillon E.
    , Sharon A., Simon A., ten Have A., Tudzynski B., Tudzynski P., Wincker P., Andrew M., Anthouard V., Beever R.E., Beffa R., Benoit I., Bouzid O., Brault B., Chen Z., Choquer M., Collemare J., Cotton P., Danchin E.G., Da Silva C., Gautier A., Giraud C., Giraud T., Gonzalez C., Grossetete S., Gueldener U., Henrissat B., Howlett B.J., Kodira C., Kretschmer M., Lappartient A., Leroch M., Levis C., Mauceli E., Neuveglise C., Oeser B., Pearson M., Poulain J., Poussereau N., Quesneville H., Rascle C., Schumacher J., Segurens B., Sexton A., Silva E., Sirven C., Soanes D.M., Talbot N.J., Templeton M., Yandava C., Yarden O., Zeng Q., Rollins J.A., Lebrun M.-H., Dickman M.
    PLoS Genet. 7:E1002230-E1002230(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 18683 / 1980 / Ss-1Imported.

Entry informationi

Entry nameiA7EIA7_SCLS1
AccessioniPrimary (citable) accession number: A7EIA7
Entry historyi
Integrated into UniProtKB/TrEMBL: September 11, 2007
Last sequence update: September 11, 2007
Last modified: June 24, 2015
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.