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A7EDF2

- A7EDF2_SCLS1

UniProt

A7EDF2 - A7EDF2_SCLS1

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Protein
Submitted name: Putative uncharacterized protein
Gene
SS1G_03342
Organism
Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:SS1G_03342Imported
OrganismiSclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)
Taxonomic identifieri665079 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaLeotiomycetesHelotialesSclerotiniaceaeSclerotinia
ProteomesiUP000001312: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi665079.A7EDF2.

Structurei

3D structure databases

ProteinModelPortaliA7EDF2.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
KOiK10777.
OMAiIELAGSH.
OrthoDBiEOG7QC84G.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
3.40.50.10190. 2 hits.
InterProiIPR001357. BRCT_dom.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF00533. BRCT. 1 hit.
PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 2 hits.
[Graphical view]
SMARTiSM00292. BRCT. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
PROSITEiPS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A7EDF2-1 [UniParc]FASTAAdd to Basket

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MASSQQNKNK KPSPEAIADD ERQYTYSTIS KEELNDKYPD RPRNHGKTLP    50
FHELFQSLFD PLEANKNKKP GPAAARKKLG PHGPNTLSPN EIRKNIIVRF 100
MSRWRSEVGD DFYPALRLII PEKDRDRAMC YEVLSKRPMR QKVGDMTIGE 150
ANEMLDKLAL AQKEEHQLPI FREFYQKMNA EELVWLIRMI LRQMKIGASE 200
KTFLNLWHPD GEALFNVSSS LRRVCWELTD PNVTLEADET GVELMSCFQP 250
QLAQFMSNSF EKMVEKMCAQ NPRDKGNGSE FWIEEKLDGE RIQMHMEEDD 300
DIPGGRRFIW WSRKGKDYTY LYGNGFEDDN SALTRHMKNA FDPRVSSIIL 350
DGEMITWDPV TNKMVAFGTL KTAAISGGKD PFSATAARPV FKVFDCLSEQ 400
VDVSLSSCKQ RTHTNHKIGA NPMKCFSFFK VGGGFNADDY AAIRHQTDGK 450
WIKWDAKSPP TEFIELAGSH QEKERPDVWI KPDDSIVMEV KAASVSISDS 500
FRTNFTLRFP RFKRLRPDKD WKSALSIEGF MELKAKVEEG EDDEFQVDKK 550
KRNSKRLKRD KVIAGTEDDG KVLYEGPTTG VFEGMDFCIL SDMILPVKKS 600
KAELETIIKN NGGRIYQSPS AKEDIIVIAD KRVVKVASLI KSGKINIVKP 650
QWVLHAVAQM EIDAKLGRSR FVIPYETGHM LFTREENKES IAANSDQYGD 700
PYCRDVGPEE LRGIMDGMDL NIDIRIAMNH FQFACGVFLH GEDGDTHVQK 750
EDVTHIIFGD VSSERIRETK RELSGRTPHL VSWKWIRDSW DTETRLDENG 800
YLVEL 805
Length:805
Mass (Da):92,192
Last modified:September 11, 2007 - v1
Checksum:iDAF95EBEAA7C1E9E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CH476624 Genomic DNA. Translation: EDO00868.1.
RefSeqiXP_001595253.1. XM_001595203.1.

Genome annotation databases

EnsemblFungiiEDO00868; EDO00868; SS1G_03342.
GeneIDi5491742.
KEGGissl:SS1G_03342.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CH476624 Genomic DNA. Translation: EDO00868.1 .
RefSeqi XP_001595253.1. XM_001595203.1.

3D structure databases

ProteinModelPortali A7EDF2.
ModBasei Search...

Protein-protein interaction databases

STRINGi 665079.A7EDF2.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii EDO00868 ; EDO00868 ; SS1G_03342 .
GeneIDi 5491742.
KEGGi ssl:SS1G_03342.

Phylogenomic databases

eggNOGi COG1793.
KOi K10777.
OMAi IELAGSH.
OrthoDBi EOG7QC84G.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
3.40.50.10190. 2 hits.
InterProi IPR001357. BRCT_dom.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF00533. BRCT. 1 hit.
PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 2 hits.
[Graphical view ]
SMARTi SM00292. BRCT. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
PROSITEi PS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea."
    Amselem J., Cuomo C.A., van Kan J.A.L., Viaud M., Benito E.P., Couloux A., Coutinho P.M., de Vries R.P., Dyer P.S., Fillinger S., Fournier E., Gout L., Hahn M., Kohn L., Lapalu N., Plummer K.M., Pradier J.-M., Quevillon E.
    , Sharon A., Simon A., ten Have A., Tudzynski B., Tudzynski P., Wincker P., Andrew M., Anthouard V., Beever R.E., Beffa R., Benoit I., Bouzid O., Brault B., Chen Z., Choquer M., Collemare J., Cotton P., Danchin E.G., Da Silva C., Gautier A., Giraud C., Giraud T., Gonzalez C., Grossetete S., Gueldener U., Henrissat B., Howlett B.J., Kodira C., Kretschmer M., Lappartient A., Leroch M., Levis C., Mauceli E., Neuveglise C., Oeser B., Pearson M., Poulain J., Poussereau N., Quesneville H., Rascle C., Schumacher J., Segurens B., Sexton A., Silva E., Sirven C., Soanes D.M., Talbot N.J., Templeton M., Yandava C., Yarden O., Zeng Q., Rollins J.A., Lebrun M.-H., Dickman M.
    PLoS Genet. 7:E1002230-E1002230(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 18683 / 1980 / Ss-1.

Entry informationi

Entry nameiA7EDF2_SCLS1
AccessioniPrimary (citable) accession number: A7EDF2
Entry historyi
Integrated into UniProtKB/TrEMBL: September 11, 2007
Last sequence update: September 11, 2007
Last modified: November 13, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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