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A7EDF2

- A7EDF2_SCLS1

UniProt

A7EDF2 - A7EDF2_SCLS1

Protein
Submitted name:

Putative uncharacterized protein

Gene

SS1G_03342

Organism
Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 39 (01 Oct 2014)
      Sequence version 1 (11 Sep 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    ORF Names:SS1G_03342Imported
    OrganismiSclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)Imported
    Taxonomic identifieri665079 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaLeotiomycetesHelotialesSclerotiniaceaeSclerotinia
    ProteomesiUP000001312: Unassembled WGS sequence

    Interactioni

    Protein-protein interaction databases

    STRINGi665079.A7EDF2.

    Structurei

    3D structure databases

    ProteinModelPortaliA7EDF2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    KOiK10777.
    OMAiIELAGSH.
    OrthoDBiEOG7QC84G.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    3.40.50.10190. 2 hits.
    InterProiIPR001357. BRCT_dom.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF00533. BRCT. 1 hit.
    PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 2 hits.
    [Graphical view]
    SMARTiSM00292. BRCT. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    SSF52113. SSF52113. 2 hits.
    PROSITEiPS50172. BRCT. 2 hits.
    PS00697. DNA_LIGASE_A1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A7EDF2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MASSQQNKNK KPSPEAIADD ERQYTYSTIS KEELNDKYPD RPRNHGKTLP    50
    FHELFQSLFD PLEANKNKKP GPAAARKKLG PHGPNTLSPN EIRKNIIVRF 100
    MSRWRSEVGD DFYPALRLII PEKDRDRAMC YEVLSKRPMR QKVGDMTIGE 150
    ANEMLDKLAL AQKEEHQLPI FREFYQKMNA EELVWLIRMI LRQMKIGASE 200
    KTFLNLWHPD GEALFNVSSS LRRVCWELTD PNVTLEADET GVELMSCFQP 250
    QLAQFMSNSF EKMVEKMCAQ NPRDKGNGSE FWIEEKLDGE RIQMHMEEDD 300
    DIPGGRRFIW WSRKGKDYTY LYGNGFEDDN SALTRHMKNA FDPRVSSIIL 350
    DGEMITWDPV TNKMVAFGTL KTAAISGGKD PFSATAARPV FKVFDCLSEQ 400
    VDVSLSSCKQ RTHTNHKIGA NPMKCFSFFK VGGGFNADDY AAIRHQTDGK 450
    WIKWDAKSPP TEFIELAGSH QEKERPDVWI KPDDSIVMEV KAASVSISDS 500
    FRTNFTLRFP RFKRLRPDKD WKSALSIEGF MELKAKVEEG EDDEFQVDKK 550
    KRNSKRLKRD KVIAGTEDDG KVLYEGPTTG VFEGMDFCIL SDMILPVKKS 600
    KAELETIIKN NGGRIYQSPS AKEDIIVIAD KRVVKVASLI KSGKINIVKP 650
    QWVLHAVAQM EIDAKLGRSR FVIPYETGHM LFTREENKES IAANSDQYGD 700
    PYCRDVGPEE LRGIMDGMDL NIDIRIAMNH FQFACGVFLH GEDGDTHVQK 750
    EDVTHIIFGD VSSERIRETK RELSGRTPHL VSWKWIRDSW DTETRLDENG 800
    YLVEL 805
    Length:805
    Mass (Da):92,192
    Last modified:September 11, 2007 - v1
    Checksum:iDAF95EBEAA7C1E9E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH476624 Genomic DNA. Translation: EDO00868.1.
    RefSeqiXP_001595253.1. XM_001595203.1.

    Genome annotation databases

    EnsemblFungiiEDO00868; EDO00868; SS1G_03342.
    GeneIDi5491742.
    KEGGissl:SS1G_03342.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH476624 Genomic DNA. Translation: EDO00868.1 .
    RefSeqi XP_001595253.1. XM_001595203.1.

    3D structure databases

    ProteinModelPortali A7EDF2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 665079.A7EDF2.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii EDO00868 ; EDO00868 ; SS1G_03342 .
    GeneIDi 5491742.
    KEGGi ssl:SS1G_03342.

    Phylogenomic databases

    eggNOGi COG1793.
    KOi K10777.
    OMAi IELAGSH.
    OrthoDBi EOG7QC84G.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    3.40.50.10190. 2 hits.
    InterProi IPR001357. BRCT_dom.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF00533. BRCT. 1 hit.
    PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 2 hits.
    [Graphical view ]
    SMARTi SM00292. BRCT. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    SSF52113. SSF52113. 2 hits.
    PROSITEi PS50172. BRCT. 2 hits.
    PS00697. DNA_LIGASE_A1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea."
      Amselem J., Cuomo C.A., van Kan J.A.L., Viaud M., Benito E.P., Couloux A., Coutinho P.M., de Vries R.P., Dyer P.S., Fillinger S., Fournier E., Gout L., Hahn M., Kohn L., Lapalu N., Plummer K.M., Pradier J.-M., Quevillon E.
      , Sharon A., Simon A., ten Have A., Tudzynski B., Tudzynski P., Wincker P., Andrew M., Anthouard V., Beever R.E., Beffa R., Benoit I., Bouzid O., Brault B., Chen Z., Choquer M., Collemare J., Cotton P., Danchin E.G., Da Silva C., Gautier A., Giraud C., Giraud T., Gonzalez C., Grossetete S., Gueldener U., Henrissat B., Howlett B.J., Kodira C., Kretschmer M., Lappartient A., Leroch M., Levis C., Mauceli E., Neuveglise C., Oeser B., Pearson M., Poulain J., Poussereau N., Quesneville H., Rascle C., Schumacher J., Segurens B., Sexton A., Silva E., Sirven C., Soanes D.M., Talbot N.J., Templeton M., Yandava C., Yarden O., Zeng Q., Rollins J.A., Lebrun M.-H., Dickman M.
      PLoS Genet. 7:E1002230-E1002230(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 18683 / 1980 / Ss-1Imported.

    Entry informationi

    Entry nameiA7EDF2_SCLS1
    AccessioniPrimary (citable) accession number: A7EDF2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 11, 2007
    Last sequence update: September 11, 2007
    Last modified: October 1, 2014
    This is version 39 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3