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A7EDF2

- A7EDF2_SCLS1

UniProt

A7EDF2 - A7EDF2_SCLS1

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Protein
Submitted name:

Putative uncharacterized protein

Gene

SS1G_03342

Organism
Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:SS1G_03342Imported
OrganismiSclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)Imported
Taxonomic identifieri665079 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaLeotiomycetesHelotialesSclerotiniaceaeSclerotinia
ProteomesiUP000001312: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi665079.A7EDF2.

Structurei

3D structure databases

ProteinModelPortaliA7EDF2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
InParanoidiA7EDF2.
KOiK10777.
OMAiIELAGSH.
OrthoDBiEOG7QC84G.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
3.40.50.10190. 2 hits.
InterProiIPR001357. BRCT_dom.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR029710. LIG4.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PANTHERiPTHR10459:SF7. PTHR10459:SF7. 1 hit.
PfamiPF00533. BRCT. 1 hit.
PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 2 hits.
[Graphical view]
SMARTiSM00292. BRCT. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
PROSITEiPS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A7EDF2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MASSQQNKNK KPSPEAIADD ERQYTYSTIS KEELNDKYPD RPRNHGKTLP
60 70 80 90 100
FHELFQSLFD PLEANKNKKP GPAAARKKLG PHGPNTLSPN EIRKNIIVRF
110 120 130 140 150
MSRWRSEVGD DFYPALRLII PEKDRDRAMC YEVLSKRPMR QKVGDMTIGE
160 170 180 190 200
ANEMLDKLAL AQKEEHQLPI FREFYQKMNA EELVWLIRMI LRQMKIGASE
210 220 230 240 250
KTFLNLWHPD GEALFNVSSS LRRVCWELTD PNVTLEADET GVELMSCFQP
260 270 280 290 300
QLAQFMSNSF EKMVEKMCAQ NPRDKGNGSE FWIEEKLDGE RIQMHMEEDD
310 320 330 340 350
DIPGGRRFIW WSRKGKDYTY LYGNGFEDDN SALTRHMKNA FDPRVSSIIL
360 370 380 390 400
DGEMITWDPV TNKMVAFGTL KTAAISGGKD PFSATAARPV FKVFDCLSEQ
410 420 430 440 450
VDVSLSSCKQ RTHTNHKIGA NPMKCFSFFK VGGGFNADDY AAIRHQTDGK
460 470 480 490 500
WIKWDAKSPP TEFIELAGSH QEKERPDVWI KPDDSIVMEV KAASVSISDS
510 520 530 540 550
FRTNFTLRFP RFKRLRPDKD WKSALSIEGF MELKAKVEEG EDDEFQVDKK
560 570 580 590 600
KRNSKRLKRD KVIAGTEDDG KVLYEGPTTG VFEGMDFCIL SDMILPVKKS
610 620 630 640 650
KAELETIIKN NGGRIYQSPS AKEDIIVIAD KRVVKVASLI KSGKINIVKP
660 670 680 690 700
QWVLHAVAQM EIDAKLGRSR FVIPYETGHM LFTREENKES IAANSDQYGD
710 720 730 740 750
PYCRDVGPEE LRGIMDGMDL NIDIRIAMNH FQFACGVFLH GEDGDTHVQK
760 770 780 790 800
EDVTHIIFGD VSSERIRETK RELSGRTPHL VSWKWIRDSW DTETRLDENG

YLVEL
Length:805
Mass (Da):92,192
Last modified:September 11, 2007 - v1
Checksum:iDAF95EBEAA7C1E9E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CH476624 Genomic DNA. Translation: EDO00868.1.
RefSeqiXP_001595253.1. XM_001595203.1.

Genome annotation databases

EnsemblFungiiEDO00868; EDO00868; SS1G_03342.
GeneIDi5491742.
KEGGissl:SS1G_03342.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CH476624 Genomic DNA. Translation: EDO00868.1 .
RefSeqi XP_001595253.1. XM_001595203.1.

3D structure databases

ProteinModelPortali A7EDF2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 665079.A7EDF2.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii EDO00868 ; EDO00868 ; SS1G_03342 .
GeneIDi 5491742.
KEGGi ssl:SS1G_03342.

Phylogenomic databases

eggNOGi COG1793.
InParanoidi A7EDF2.
KOi K10777.
OMAi IELAGSH.
OrthoDBi EOG7QC84G.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
3.40.50.10190. 2 hits.
InterProi IPR001357. BRCT_dom.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR029710. LIG4.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
PANTHERi PTHR10459:SF7. PTHR10459:SF7. 1 hit.
Pfami PF00533. BRCT. 1 hit.
PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 2 hits.
[Graphical view ]
SMARTi SM00292. BRCT. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
PROSITEi PS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea."
    Amselem J., Cuomo C.A., van Kan J.A.L., Viaud M., Benito E.P., Couloux A., Coutinho P.M., de Vries R.P., Dyer P.S., Fillinger S., Fournier E., Gout L., Hahn M., Kohn L., Lapalu N., Plummer K.M., Pradier J.-M., Quevillon E.
    , Sharon A., Simon A., ten Have A., Tudzynski B., Tudzynski P., Wincker P., Andrew M., Anthouard V., Beever R.E., Beffa R., Benoit I., Bouzid O., Brault B., Chen Z., Choquer M., Collemare J., Cotton P., Danchin E.G., Da Silva C., Gautier A., Giraud C., Giraud T., Gonzalez C., Grossetete S., Gueldener U., Henrissat B., Howlett B.J., Kodira C., Kretschmer M., Lappartient A., Leroch M., Levis C., Mauceli E., Neuveglise C., Oeser B., Pearson M., Poulain J., Poussereau N., Quesneville H., Rascle C., Schumacher J., Segurens B., Sexton A., Silva E., Sirven C., Soanes D.M., Talbot N.J., Templeton M., Yandava C., Yarden O., Zeng Q., Rollins J.A., Lebrun M.-H., Dickman M.
    PLoS Genet. 7:E1002230-E1002230(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 18683 / 1980 / Ss-1Imported.

Entry informationi

Entry nameiA7EDF2_SCLS1
AccessioniPrimary (citable) accession number: A7EDF2
Entry historyi
Integrated into UniProtKB/TrEMBL: September 11, 2007
Last sequence update: September 11, 2007
Last modified: October 29, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3