Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Ni,Fe-hydrogenase small subunit

Gene

hoxS

Organism
Hydrogenobacter thermophilus
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ferredoxin hydrogenase activity Source: InterPro
  2. iron-sulfur cluster binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Ni,Fe-hydrogenase small subunitImported
Gene namesi
Name:hoxSImported
OrganismiHydrogenobacter thermophilusImported
Taxonomic identifieri940 [NCBI]
Taxonomic lineageiBacteriaAquificaeAquificalesAquificaceaeHydrogenobacter

Subcellular locationi

GO - Cellular componenti

  1. ferredoxin hydrogenase complex Source: InterPro
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

KOiK06282.

Family and domain databases

Gene3Di3.40.50.700. 1 hit.
4.10.480.10. 1 hit.
InterProiIPR027394. Cytochrome-c3_hydrogenase_C.
IPR006137. NADH_UbQ_OxRdtase-like_20kDa.
IPR001821. NiFe_hydrogenase_ssu.
[Graphical view]
PANTHERiPTHR30013. PTHR30013. 1 hit.
PfamiPF14720. NiFe_hyd_SSU_C. 1 hit.
PF01058. Oxidored_q6. 1 hit.
[Graphical view]
PIRSFiPIRSF000310. NiFe_hyd_ssu. 1 hit.

Sequencei

Sequence statusi: Complete.

A7BI64-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATVLWLHGG ACNGNTMSFL NAEYPSVCDL VTDFGIEILW HPSAGLEMGN
60 70 80 90 100
QVQALLRDIL AEKIPLDIFV FEGTVVLGPN GTGRYNMFAG RPMKDWVYEL
110 120 130 140 150
AHVAKFVVAV GNCACQGNIP AVPPNPTEST GLQFHKTKKG GFLGEHFVSR
160 170 180 190 200
GGLPVINIPG CPAHYDWITQ ILVALAVGRA SDIQLDEYNR PLTFFKTFSQ
210 220 230 240 250
TGCTRVQFHE WKISAEEFGQ GTRKGCLFYE LGCRGPLTHA PCNRILWNGV
260 270 280 290 300
SSKQRSGHPC IGCTEFAFPW FDLAPGTIFK TQKVAGVIPK ESVYEADKFT
310 320
YMLHAVTARI AAPKWATEDI FVV
Length:323
Mass (Da):35,547
Last modified:September 11, 2007 - v1
Checksum:i77DC856428B54865
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB290569 Genomic DNA. Translation: BAF73671.1.
RefSeqiYP_003432121.1. NC_013799.1.
YP_005511148.1. NC_017161.1.

Genome annotation databases

GeneIDi12100591.
8773465.
KEGGihte:Hydth_0454.
hth:HTH_0456.
PATRICi32209791. VBIHydThe36152_0459.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB290569 Genomic DNA. Translation: BAF73671.1.
RefSeqiYP_003432121.1. NC_013799.1.
YP_005511148.1. NC_017161.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi12100591.
8773465.
KEGGihte:Hydth_0454.
hth:HTH_0456.
PATRICi32209791. VBIHydThe36152_0459.

Phylogenomic databases

KOiK06282.

Family and domain databases

Gene3Di3.40.50.700. 1 hit.
4.10.480.10. 1 hit.
InterProiIPR027394. Cytochrome-c3_hydrogenase_C.
IPR006137. NADH_UbQ_OxRdtase-like_20kDa.
IPR001821. NiFe_hydrogenase_ssu.
[Graphical view]
PANTHERiPTHR30013. PTHR30013. 1 hit.
PfamiPF14720. NiFe_hyd_SSU_C. 1 hit.
PF01058. Oxidored_q6. 1 hit.
[Graphical view]
PIRSFiPIRSF000310. NiFe_hyd_ssu. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Sequencing and reverse transcription-polymerase chain reaction (RT-PCR) analysis of four hydrogenase gene clusters from an obligately autotrophic hydrogen-oxidizing bacterium, Hydrogenobacter thermophilus TK-6."
    Ueda Y., Yamamoto Y., Urasaki T., Arai H., Ishii M., Igarashi Y.
    J. Biosci. Bioeng. 104:470-475(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: TK-6Imported.

Entry informationi

Entry nameiA7BI64_HYDTH
AccessioniPrimary (citable) accession number: A7BI64
Entry historyi
Integrated into UniProtKB/TrEMBL: September 11, 2007
Last sequence update: September 11, 2007
Last modified: March 4, 2015
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.