Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

A7AZY4 (A7AZY4_RUMGN) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Lipoprotein PIRNR PIRNR002854
Gene names
ORF Names:RUMGNA_00858 EMBL EDN78697.1
OrganismRuminococcus gnavus ATCC 29149 EMBL EDN78697.1
Taxonomic identifier411470 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesLachnospiraceaeBlautia

Protein attributes

Sequence length278 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the nlpA lipoprotein family. PIRNR PIRNR002854

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL EDN78697.1

Ontologies

Keywords
   LigandChloride PDB 4IB2
   PTMLipoprotein PIRNR PIRNR002854 EMBL EDN78697.1
   Technical term3D-structure PDB 4IB2
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Binding site1291Chloride 2; via amide nitrogen PDB 4IB2
Binding site1371Chloride 3; via amide nitrogen PDB 4IB2
Binding site1841Chloride 4; via amide nitrogen PDB 4IB2
Binding site1901Chloride 1; via amide nitrogen PDB 4IB2

Sequences

Sequence LengthMass (Da)Tools
A7AZY4 [UniParc].

Last modified September 11, 2007. Version 1.
Checksum: 34D0E8E84D60FA96

FASTA27830,289
        10         20         30         40         50         60 
MKKVTAIILT GILTLGVLTG CQSNSKAEEK GSSEDAKTIK VAASATPHAE ILEQAKSILK 

        70         80         90        100        110        120 
KEGYQLEVTV FDDYVQPNEV VESGEFDANY FQHVPYLESF NEEKGTHLVD AGDIHYEPFG 

       130        140        150        160        170        180 
IYPGTKKSLD EISEGDKIAV PNDTTNEARA LLLLQDNGII TLKDGAGLNA TVNDIEENPY 

       190        200        210        220        230        240 
NVEIVELEAA QVARVTGETA YVVLNGNYAL EAGYSVAKDA LAYEKSDSEA AKTYVNIIAV 

       250        260        270 
KEGNEKEEKI QALVKALKSD EIKEYIEKTY DGAVIPFE 

« Hide

References

[1]Fulton L., Clifton S., Fulton B., Xu J., Minx P., Pepin K.H., Johnson M., Thiruvilangam P., Bhonagiri V., Nash W.E., Mardis E.R., Wilson R.K.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 29149 EMBL EDN78697.1.
[2]"Draft genome sequence of Ruminococcus gnavus (ATCC 29149)."
Sudarsanam P., Ley R., Guruge J., Turnbaugh P.J., Mahowald M., Liep D., Gordon J.
Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 29149 EMBL EDN78697.1.
[3]"Crystal structure of a putative lipoprotein (RUMGNA_00858) from Ruminococcus gnavus ATCC 29149 at 1.76 A resolution."
JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG)
Submitted (DEC-2012) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.76 ANGSTROMS) OF 28-278 IN COMPLEX WITH CHLORIDE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AAYG02000008 Genomic DNA. Translation: EDN78697.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4IB2X-ray1.76A/B28-278[»]
ProteinModelPortalA7AZY4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEDN78697; EDN78697; RUMGNA_00858.
PATRIC29783838. VBIRumGna65643_0732.

Family and domain databases

InterProIPR004872. Lipoprotein_NlpA.
[Graphical view]
PfamPF03180. Lipoprotein_9. 1 hit.
[Graphical view]
PIRSFPIRSF002854. MetQ. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA7AZY4_RUMGN
AccessionPrimary (citable) accession number: A7AZY4
Entry history
Integrated into UniProtKB/TrEMBL: September 11, 2007
Last sequence update: September 11, 2007
Last modified: June 11, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)