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Protein
Submitted name:

Fibronectin splice variant A

Gene

FN1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Fibronectin splice variant AImported
Gene namesi
Name:FN1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

PTM / Processingi

Proteomic databases

PaxDbiA6YID2.
PRIDEiA6YID2.

Expressioni

Gene expression databases

BgeeiA6YID2.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000346839.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 9090Fibronectin type-IIIInterPro annotationAdd
BLAST
Domaini91 – 17888Fibronectin type-IIIInterPro annotationAdd
BLAST
Domaini179 – 27294Fibronectin type-IIIInterPro annotationAdd
BLAST
Domaini273 – 35987Fibronectin type-IIIInterPro annotationAdd
BLAST
Domaini360 – 45091Fibronectin type-IIIInterPro annotationAdd
BLAST
Domaini529 – 61385Fibronectin type-IIIInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG410IF4N. Eukaryota.
ENOG410Y2NH. LUCA.
HOVERGENiHBG103380.

Family and domain databases

Gene3Di2.60.40.10. 6 hits.
InterProiIPR003961. FN3_dom.
IPR013783. Ig-like_fold.
[Graphical view]
PfamiPF00041. fn3. 6 hits.
[Graphical view]
SMARTiSM00060. FN3. 6 hits.
[Graphical view]
SUPFAMiSSF49265. SSF49265. 4 hits.
PROSITEiPS50853. FN3. 6 hits.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

A6YID2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
SQMQVTDVQD NSISVKWLPS SSPVTGYRVT TTPKNGPGPT KTKTAGPDQT
60 70 80 90 100
EMTIEGLQPT VEYVVSVYAQ NPSGESQPLV QTAVTNIDRP KGLAFTDVDV
110 120 130 140 150
DSIKIAWESP QGQVSRYRVT YSSPEDGIHE LFPAPDGEED TAELQGLRPG
160 170 180 190 200
SEYTVSVVAL HDDMESQPLI GTQSTAIPAP TDLKFTQVTP TSLSAQWTPP
210 220 230 240 250
NVQLTGYRVR VTPKEKTGPM KEINLAPDSS SVVVSGLMVA TKYEVSVYAL
260 270 280 290 300
KDTLTSRPAQ GVVTTLENVS PPRRARVTDA TETTITISWR TKTETITGFQ
310 320 330 340 350
VDAVPANGQT PIQRTIKPDV RSYTITGLQP GTDYKIYLYT LNDNARSSPV
360 370 380 390 400
VIDASTAIDA PSNLRFLATT PNSLLVSWQP PRARITGYII KYEKPGSPPR
410 420 430 440 450
EVVPRPRPGV TEATITGLEP GTEYTIYVIA LKNNQKSEPL IGRKKTDELP
460 470 480 490 500
QLVTLPHPNL HGPEILDVPS TVQKTPFVTH PGYDTGNGIQ LPGTSGQQPS
510 520 530 540 550
VGQQMIFEEH GFRRTTPPTT ATPIRHRPRP YPPNVGQEAL SQTTISWAPF
560 570 580 590 600
QDTSEYIISC HPVGTDEEPL QFRVPGTSTS ATLTGLTRGA TYNVIVEALK
610
DQQRHKVREE VVT
Length:613
Mass (Da):66,807
Last modified:August 21, 2007 - v1
Checksum:i79C70E35E86157B2
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported
Non-terminal residuei613 – 6131Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EF550130 mRNA. Translation: ABR68534.1.
UniGeneiHs.203717.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EF550130 mRNA. Translation: ABR68534.1.
UniGeneiHs.203717.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000346839.

Proteomic databases

PaxDbiA6YID2.
PRIDEiA6YID2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiENOG410IF4N. Eukaryota.
ENOG410Y2NH. LUCA.
HOVERGENiHBG103380.

Miscellaneous databases

ChiTaRSiFN1. human.

Gene expression databases

BgeeiA6YID2.

Family and domain databases

Gene3Di2.60.40.10. 6 hits.
InterProiIPR003961. FN3_dom.
IPR013783. Ig-like_fold.
[Graphical view]
PfamiPF00041. fn3. 6 hits.
[Graphical view]
SMARTiSM00060. FN3. 6 hits.
[Graphical view]
SUPFAMiSSF49265. SSF49265. 4 hits.
PROSITEiPS50853. FN3. 6 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiA6YID2_HUMAN
AccessioniPrimary (citable) accession number: A6YID2
Entry historyi
Integrated into UniProtKB/TrEMBL: August 21, 2007
Last sequence update: August 21, 2007
Last modified: June 8, 2016
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.