A6WV92 (IHFB_OCHA4) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Integration host factor subunit beta
Short name=IHF-beta

Gene names

Name:	ihfB
Synonyms:	himD
Ordered Locus Names:	Oant_0165

Organism

Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) [Complete proteome] [HAMAP]

Taxonomic identifier

439375 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Brucellaceae › Ochrobactrum

Protein attributes

Sequence length	94 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control By similarity. HAMAP MF_00381
Subunit structure	Heterodimer of an alpha and a beta chain By similarity. HAMAP MF_00381
Sequence similarities	Belongs to the bacterial histone-like protein family.

Ontologies

Keywords
Biological process	DNA recombination Transcription Transcription regulation Translation regulation
Ligand	DNA-binding
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA recombination Inferred from electronic annotation. Source: UniProtKB-KW regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW regulation of translation Inferred from electronic annotation. Source: UniProtKB-KW transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	chromosome Inferred from electronic annotation. Source: InterPro
Molecular function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 94	94	Integration host factor subunit beta HAMAP MF_00381		PRO_1000060624

Sequences

	Sequence		Length	Mass (Da)
	A6WV92 [UniParc]. Last modified August 21, 2007. Version 1. Checksum: 15988C37A6F9FDD8	FASTA	94	10,567
	10 20 30 40 50 60 MIKSELVQII ASRNPHLFQR DVENIVGAVF DEITNALAEG NRVELRGFGA FSVKNRPARS 70 80 90 GRNPRTGETV DVEEKWVPFF KTGKELRDRL NGAV

References

[1]

"Complete sequence of chromosome 1 of Ochrobactrum anthropi ATCC 49188." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Garcia E., Richardson P. Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49188 / DSM 6882 / NCTC 12168.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000758 Genomic DNA. Translation: ABS12896.1.
RefSeq	YP_001368725.1. NC_009667.1.
3D structure databases
ProteinModelPortal	A6WV92.
SMR	A6WV92. Positions 40-91.
ModBase	Search...
Protein-protein interaction databases
STRING	A6WV92.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5379092.
GenomeReviews	Gene locus Oant_0165 in contig CP000758_GR.
KEGG	oan:Oant_0165.
PATRIC	20465293. VBIOchAnt73124_0175.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0776.
HOGENOM	HBG705085.
OMA	PEKYVPH.
ProtClustDB	PRK00199.
Enzyme and pathway databases
BioCyc	OANT439375:OANT_0165-MONOMER.
Family and domain databases
HAMAP	MF_00381. IHF-beta. [Tree]
InterPro	IPR023630. DNA-bd_HU/IHF. IPR000119. Hist_DNA-bd_bac. IPR020816. Histone-like_DNA-bd_CS. IPR010992. IHF-like_DNA-bd. IPR005685. IHF_beta. [Graphical view]
Gene3D	G3DSA:4.10.520.10. Hist_DNA_bd_bac. 1 hit.
KO	K05788.
Pfam	PF00216. Bac_DNA_binding. 1 hit. [Graphical view]
PRINTS	PR01727. DNABINDINGHU.
SMART	SM00411. BHL. 1 hit. [Graphical view]
SUPFAM	SSF47729. IHF_like_DNA_bnd. 1 hit.
TIGRFAMs	TIGR00988. Hip. 1 hit.
PROSITE	PS00045. HISTONE_LIKE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

IHFB_OCHA4

Accession

Primary (citable) accession number: A6WV92

Entry history

Integrated into UniProtKB/Swiss-Prot:	February 5, 2008
Last sequence update:	August 21, 2007
Last modified:	December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program