A6WUS9 (RS20_OCHA4) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
30S ribosomal protein S20

Gene names

Name:	rpsT
Ordered Locus Names:	Oant_0002

Organism

Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) [Complete proteome] [HAMAP]

Taxonomic identifier

439375 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Brucellaceae › Ochrobactrum

Protein attributes

Sequence length	88 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds directly to 16S ribosomal RNA By similarity. HAMAP MF_00500
Sequence similarities	Belongs to the ribosomal protein S20P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 88	88	30S ribosomal protein S20 HAMAP MF_00500		PRO_1000014617

Sequences

	Sequence		Length	Mass (Da)
	A6WUS9 [UniParc]. Last modified August 21, 2007. Version 1. Checksum: 51AE10B5FCD8069A	FASTA	88	9,703
	10 20 30 40 50 60 MANTPSAKKA VRKIAARTEI NKSRRSRVRT FVRKLEDALL SGDKQAAEVA FKAAEPELMR 70 80 AASKGVMHKN TASRKVSRLA QRVKALKA

References

[1]

"Complete sequence of chromosome 1 of Ochrobactrum anthropi ATCC 49188." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Garcia E., Richardson P. Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49188 / DSM 6882 / NCTC 12168.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000758 Genomic DNA. Translation: ABS12733.1.
RefSeq	YP_001368562.1. NC_009667.1.
3D structure databases
ProteinModelPortal	A6WUS9.
ModBase	Search...
Protein-protein interaction databases
STRING	A6WUS9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5381147.
GenomeReviews	Gene locus Oant_0002 in contig CP000758_GR.
KEGG	oan:Oant_0002.
PATRIC	20464945. VBIOchAnt73124_0002.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0268.
HOGENOM	HBG734145.
OMA	PEIMRAV.
ProtClustDB	PRK00239.
Enzyme and pathway databases
BioCyc	OANT439375:OANT_0002-MONOMER.
Family and domain databases
HAMAP	MF_00500. Ribosomal_S20. [Tree]
InterPro	IPR002583. Ribosomal_S20. [Graphical view]
Gene3D	G3DSA:1.20.58.110. Ribosomal_S20. 1 hit.
KO	K02968.
Pfam	PF01649. Ribosomal_S20p. 1 hit. [Graphical view]
ProDom	PD004231. Ribosomal_S20. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF46992. Ribosomal_S20p. 1 hit.
TIGRFAMs	TIGR00029. S20. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RS20_OCHA4

Accession

Primary (citable) accession number: A6WUS9

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	August 21, 2007
Last modified:	December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program