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A6WM20 (A6WM20_SHEB8) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Shew185_1716
OrganismShewanella baltica (strain OS185) [Complete proteome] [HAMAP] EMBL ABS07859.1
Taxonomic identifier402882 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length248 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2727 Potential EMBL ABS07859.1
Chain28 – 248221 Potential EMBL ABS07859.1
PRO_5000260781

Sequences

Sequence LengthMass (Da)Tools
A6WM20 [UniParc].

Last modified August 21, 2007. Version 1.
Checksum: 535903A812EEAD1E

FASTA24826,479
        10         20         30         40         50         60 
MSFNLNLTGK VALVTGASRG IGRAIAETLV EAGAVVIGTA TSEKGAAAIQ EYLGDKGFGL 

        70         80         90        100        110        120 
VLNVTDSESV THLFASIKEK AGDVDILVNN AGITRDNLLM RMKDDEWQDI IDTNLTSLFR 

       130        140        150        160        170        180 
LSKPVMRTMM KKRFGRIINI GSVVGTMGNA GQVNYSAAKA GLIGFTKSLA REVASRQITV 

       190        200        210        220        230        240 
NAIAPGFIQT DMTDELTEEQ QKAIMSQVPM ERLGQAQEIA NAVLFLASDS AAYITGETLH 


VNGGMYMV 

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References

[1]"Complete sequence of chromosome of Shewanella baltica OS185."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Mikhailova N., Brettar I., Rodrigues J., Konstantinidis K., Tiedje J., Richardson P.
Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: OS185.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000753 Genomic DNA. Translation: ABS07859.1.
RefSeqYP_001365922.1. NC_009665.1.

3D structure databases

ProteinModelPortalA6WM20.
SMRA6WM20. Positions 6-248.
ModBaseSearch...

Protein-protein interaction databases

STRINGA6WM20.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5373132.
GenomeReviewsGene locus Shew185_1716 in contig CP000753_GR.
KEGGsbm:Shew185_1716.
PATRIC23460138. VBISheBal127872_1896.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1028.
HOGENOMHBG750976.
OMADNLMLRM.
ProtClustDBCLSK906856.

Enzyme and pathway databases

BioCycSBAL402882:SHEW185_1716-MONOMER.

Family and domain databases

InterProIPR011284. 3oxo_ACP_reduc.
IPR002198. DH_sc/Rdtase_SDR.
IPR002347. Glc/ribitol_DH.
IPR016040. NAD(P)-bd_dom.
IPR020904. Sc_DH/Rdtase_CS.
[Graphical view]
Gene3DG3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KOK00059.
PfamPF00106. adh_short. 1 hit.
[Graphical view]
PRINTSPR00081. GDHRDH.
PR00080. SDRFAMILY.
TIGRFAMsTIGR01830. 3oxo_ACP_reduc. 1 hit.
PROSITEPS00061. ADH_SHORT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA6WM20_SHEB8
AccessionPrimary (citable) accession number: A6WM20
Entry history
Integrated into UniProtKB/TrEMBL: August 21, 2007
Last sequence update: August 21, 2007
Last modified: January 25, 2012
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)