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Protein

Ribosomal RNA small subunit methyltransferase C

Gene

rsmC

Organism
Shewanella baltica (strain OS185)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle.UniRule annotation

Catalytic activityi

S-adenosyl-L-methionine + guanine(1207) in 16S rRNA = S-adenosyl-L-homocysteine + N(2)-methylguanine(1207) in 16S rRNA.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Methyltransferase, Transferase

Keywords - Biological processi

rRNA processing

Keywords - Ligandi

S-adenosyl-L-methionine

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA small subunit methyltransferase CUniRule annotation (EC:2.1.1.172UniRule annotation)
Alternative name(s):
16S rRNA m2G1207 methyltransferaseUniRule annotation
rRNA (guanine-N(2)-)-methyltransferase RsmCUniRule annotation
Gene namesi
Name:rsmCUniRule annotation
Ordered Locus Names:Shew185_0806
OrganismiShewanella baltica (strain OS185)
Taxonomic identifieri402882 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003697681 – 347Ribosomal RNA small subunit methyltransferase CAdd BLAST347

Interactioni

Subunit structurei

Monomer.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliA6WJH4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the methyltransferase superfamily. RsmC family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000218308.
KOiK00564.
OMAiRHCQLWQ.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_01862. 16SrRNA_methyltr_C. 1 hit.
InterProiIPR002052. DNA_methylase_N6_adenine_CS.
IPR013675. Mtase_sm_N.
IPR023543. rRNA_ssu_MeTfrase_C.
IPR029063. SAM-dependent_MTases.
IPR007848. Small_mtfrase_dom.
[Graphical view]
PfamiPF05175. MTS. 1 hit.
PF08468. MTS_N. 1 hit.
[Graphical view]
SUPFAMiSSF53335. SSF53335. 2 hits.

Sequencei

Sequence statusi: Complete.

A6WJH4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLTNPSQVII RNQDSLSQHK VLVLNHEADL LPKALLDVAA SVDALALDYH
60 70 80 90 100
HYLHLAPHAN SKLRCYFGHD LPHQDPLERE KYDTVIVYFP KAKPLAPYLF
110 120 130 140 150
NLAANHLVPN GQLLVVGENK GGIKSLVKLL PEYFATGMKL DNARHCLLFG
160 170 180 190 200
SSLEGSAPAM KLSDWVSQYQ LTTPQGEISI CNLVGVFSEK RLDLGTELLL
210 220 230 240 250
SHLPTLSGRV LDFGCGAGVI AAALLKAQPS LSLECVDINA MALASCELTL
260 270 280 290 300
AANGMTAKVY PSDGLAQTTG KFNGIISNPP FHDGLASTTS IAQNFVTDSA
310 320 330 340
KQLQHNGIWQ IVANRHLPYS DIIAAEFGQL KVVADNNKYK LYYFQHK
Length:347
Mass (Da):37,865
Last modified:August 21, 2007 - v1
Checksum:i72C917CF07F9DDC8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000753 Genomic DNA. Translation: ABS06963.1.
RefSeqiWP_012088316.1. NC_009665.1.

Genome annotation databases

EnsemblBacteriaiABS06963; ABS06963; Shew185_0806.
KEGGisbm:Shew185_0806.
PATRICi23458174. VBISheBal127872_0929.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000753 Genomic DNA. Translation: ABS06963.1.
RefSeqiWP_012088316.1. NC_009665.1.

3D structure databases

ProteinModelPortaliA6WJH4.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABS06963; ABS06963; Shew185_0806.
KEGGisbm:Shew185_0806.
PATRICi23458174. VBISheBal127872_0929.

Phylogenomic databases

HOGENOMiHOG000218308.
KOiK00564.
OMAiRHCQLWQ.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_01862. 16SrRNA_methyltr_C. 1 hit.
InterProiIPR002052. DNA_methylase_N6_adenine_CS.
IPR013675. Mtase_sm_N.
IPR023543. rRNA_ssu_MeTfrase_C.
IPR029063. SAM-dependent_MTases.
IPR007848. Small_mtfrase_dom.
[Graphical view]
PfamiPF05175. MTS. 1 hit.
PF08468. MTS_N. 1 hit.
[Graphical view]
SUPFAMiSSF53335. SSF53335. 2 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiRSMC_SHEB8
AccessioniPrimary (citable) accession number: A6WJH4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: August 21, 2007
Last modified: November 2, 2016
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.