A6WEI7 (A6WEI7_KINRD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ribonuclease PH HAMAP MF_00564
Short name=RNase PH HAMAP MF_00564
EC=2.7.7.56 HAMAP MF_00564

Alternative name(s):
tRNA nucleotidyltransferase HAMAP MF_00564

Gene names

Name:	rph HAMAP MF_00564
Ordered Locus Names:	Krad_3763

Organism

Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) [Complete proteome] [HAMAP] EMBL ABS05226.1

Taxonomic identifier

266940 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Kineosporiineae › Kineosporiaceae › Kineococcus

Protein attributes

Sequence length	248 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates By similarity. HAMAP MF_00564
Catalytic activity	tRNA(n+1) + phosphate = tRNA(n) + a nucleoside diphosphate. HAMAP MF_00564
Sequence similarities	Belongs to the RNase PH family. HAMAP MF_00564

Ontologies

Keywords
Biological process	tRNA processing HAMAP MF_00564
Molecular function	Nucleotidyltransferase HAMAP MF_00564 EMBL ABS05226.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	tRNA processing Inferred from electronic annotation. Source: HAMAP
Molecular function	tRNA binding Inferred from electronic annotation. Source: HAMAP tRNA nucleotidyltransferase activity Inferred from electronic annotation. Source: HAMAP tRNA-specific ribonuclease activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A6WEI7 [UniParc]. Last modified August 21, 2007. Version 1. Checksum: 39C65A3F4CF6BFC0	FASTA	248	26,193
	10 20 30 40 50 60 MTTPTPAPAR ADGRAVDELR PVTITRNWLD HAEGSVLVEF GRTRVLCAAS FTEGVPRWRK 70 80 90 100 110 120 GSGQGWVTAE YAMLPRATNT RGDRESVKGK IGGRTHEISR LIGRSLRAVV DTKQLGENTI 130 140 150 160 170 180 VLDCDVLQAD GGTRTAAVTG AYVALADAIS WARGQGIVKA SRQPLTGSVS AISVGVVDGV 190 200 210 220 230 240 PVLDLPYVED VRAETDMNVV VTGDGRFVEV QGTAEGTPFD RAELDALLDL AVGGCARLAA LQAEALAR

References

[1]

"Complete sequence of chromosome of Kineococcus radiotolerans SRS30216." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Lykidis A., Bagwell C.E., Shimkets L., Berry C.J., Fliermans C., Richardson P. Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-149 / DSM 14245 / SRS30216.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000750 Genomic DNA. Translation: ABS05226.1.
RefSeq	YP_001363490.1. NC_009664.2.
3D structure databases
ProteinModelPortal	A6WEI7.
SMR	A6WEI7. Positions 10-247.
ModBase	Search...
Protein-protein interaction databases
STRING	A6WEI7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5336890.
GenomeReviews	Gene locus Krad_3763 in contig CP000750_GR.
KEGG	kra:Krad_3763.
NMPDR	fig|266940.1.peg.1568.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0689.
HOGENOM	HBG737187.
OMA	MLPRATG.
ProtClustDB	PRK00173.
Family and domain databases
HAMAP	MF_00564. RNase_PH. [Tree]
InterPro	IPR001247. ExoRNase_PH_dom1. IPR015847. ExoRNase_PH_dom2. IPR020568. Ribosomal_S5_D2-typ_fold. IPR002381. RNase_PH_bac-type. IPR018336. RNase_PH_CS. [Graphical view]
KO	K00989.
Pfam	PF01138. RNase_PH. 1 hit. PF03725. RNase_PH_C. 1 hit. [Graphical view]
SUPFAM	SSF55666. 3_ExoRNase. 1 hit. SSF54211. Ribosomal_S5_D2-typ_fold. 1 hit.
TIGRFAMs	TIGR01966. RNasePH. 1 hit.
PROSITE	PS01277. RIBONUCLEASE_PH. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A6WEI7_KINRD

Accession

Primary (citable) accession number: A6WEI7

Entry history

Integrated into UniProtKB/TrEMBL:	August 21, 2007
Last sequence update:	August 21, 2007
Last modified:	November 16, 2011
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)