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Protein
Submitted name:

Putative GAF sensor protein

Gene

Krad_1986

Organism
Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Photoreceptor proteinUniRule annotation, Receptor

Keywords - Biological processi

Sensory transduction

Keywords - Ligandi

Chromophore

Enzyme and pathway databases

BioCyciKRAD266940:GI4N-238-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative GAF sensor proteinImported
Gene namesi
Ordered Locus Names:Krad_1986Imported
OrganismiKineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216)Imported
Taxonomic identifieri266940 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaKineosporialesKineosporiaceaeKineococcus
ProteomesiUP000001116 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi266940.Krad_1986.

Structurei

3D structure databases

ProteinModelPortaliA6W9I3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG4251.
HOGENOMiHOG000266441.
OMAiWIRLISD.
OrthoDBiEOG6G4VQG.

Family and domain databases

Gene3Di3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR000014. PAS.
IPR013654. PAS_2.
IPR016132. Phyto_chromo_attachment.
IPR001294. Phytochrome.
IPR013515. Phytochrome_cen-reg.
IPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PfamiPF01590. GAF. 1 hit.
PF08446. PAS_2. 1 hit.
PF00360. PHY. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
PRINTSiPR01033. PHYTOCHROME.
SMARTiSM00065. GAF. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 2 hits.
SSF55785. SSF55785. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEiPS50046. PHYTOCHROME_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A6W9I3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATGASMQPG SFTPGYGAVD LTTCEREPIH IPGAIQPHGV LLAVERGDHR
60 70 80 90 100
VVVASANAAG FFGRPLPEVL SSSLADLLGA DLTERVRGAD LLDNLDEVLH
110 120 130 140 150
ARLPGPGGSA GADAVEADVV LHVSGERLVV EIEPSPPHTA PVSYRATRGA
160 170 180 190 200
IARLAGTRGI EGLCERLVRE VRVLTGFDRV MAYRFDAQWN GEVIAEDRRE
210 220 230 240 250
DLDTFLGLHY PASDIPAQAR RLYTLNWMRL IADVDYVPSP LHPLLDPGTG
260 270 280 290 300
APLDLSHSVL RSVSPIHVEY LKNMGVGASM SISLIVEGRL WGLVACHHYS
310 320 330 340 350
GAHRPGYDAQ SAAEFLSQTA SQLIGERARS QERDGALAAQ ELLSDITAAV
360 370 380 390 400
SASGREPLTT LIEEPRLLQL LDAGGAALWT GHELLTSGQV PPSAQLRRIA
410 420 430 440 450
ALLARADGAP TFTDHLPTLD PGLAEVAQTA AGALRVGIDG TGWLLWLRPE
460 470 480 490 500
RPRLLDWSGD PHHAEITRVE GLEVRISPRK SFEKWSEVVR GRSTTWRSWH
510 520 530 540 550
AATADRLRTQ VTGIMLGRSR GQIAIAESLQ RAVVLDEAPH VPGVEVLARY
560 570 580 590 600
RPAEGSQLGG DWWDVLPLEA GRVAIVVGDV AGHGVHAAAA MAQLRTALRA
610 620 630 640 650
YLLEGHSPAS ALDRLDTLVS TLLGNHTATA LIAVVHPAGD HADGGGVDPG
660 670 680 690 700
RDPGPRVDDG AATIELASAG HLPPLLVDAA GTSVVHVPSR PMLGLGFGPT
710 720 730 740 750
AGLVSESVRA PLPPGAVLLM YTDGLVERRD AGLEETTGVL AETATRAAAD
760 770 780 790
LLPRSRGGMA AVADRLLTAV PGDAGDDTTL VLVRPAHPAA EPAARTEG
Length:798
Mass (Da):84,150
Last modified:August 21, 2007 - v1
Checksum:iB01F1BF3D062EA25
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000750 Genomic DNA. Translation: ABS03472.1.
RefSeqiWP_011981389.1. NC_009664.2.
YP_001361736.1. NC_009664.2.

Genome annotation databases

EnsemblBacteriaiABS03472; ABS03472; Krad_1986.
KEGGikra:Krad_1986.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000750 Genomic DNA. Translation: ABS03472.1.
RefSeqiWP_011981389.1. NC_009664.2.
YP_001361736.1. NC_009664.2.

3D structure databases

ProteinModelPortaliA6W9I3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi266940.Krad_1986.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABS03472; ABS03472; Krad_1986.
KEGGikra:Krad_1986.

Phylogenomic databases

eggNOGiCOG4251.
HOGENOMiHOG000266441.
OMAiWIRLISD.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciKRAD266940:GI4N-238-MONOMER.

Family and domain databases

Gene3Di3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR000014. PAS.
IPR013654. PAS_2.
IPR016132. Phyto_chromo_attachment.
IPR001294. Phytochrome.
IPR013515. Phytochrome_cen-reg.
IPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PfamiPF01590. GAF. 1 hit.
PF08446. PAS_2. 1 hit.
PF00360. PHY. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
PRINTSiPR01033. PHYTOCHROME.
SMARTiSM00065. GAF. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 2 hits.
SSF55785. SSF55785. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEiPS50046. PHYTOCHROME_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-149 / DSM 14245 / SRS30216Imported.

Entry informationi

Entry nameiA6W9I3_KINRD
AccessioniPrimary (citable) accession number: A6W9I3
Entry historyi
Integrated into UniProtKB/TrEMBL: August 21, 2007
Last sequence update: August 21, 2007
Last modified: June 24, 2015
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.