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A6W7J5 (A6W7J5_KINRD) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length583 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A6W7J5 [UniParc].

Last modified August 21, 2007. Version 1.
Checksum: 66F6B8EB08716504

FASTA58365,951
        10         20         30         40         50         60 
MDLPVPGLQE RGGLRNDPQW YKTAVFYEAL VRAFADSNGS GTGDFSGLTA KLDYLQWLGI 

        70         80         90        100        110        120 
DCLWLPPFYA SPLRDGGYDI SDYNAVLPEF GTLHDFQRLV TEAHQRGIRI VIDLVMNHTS 

       130        140        150        160        170        180 
DQHPWFQASR SDPEGPYGDF YVWSDTDEQY PDARIIFVDT ETSNWTFDPV RRQFFWHRFF 

       190        200        210        220        230        240 
SHQPDLNFDN PAVEEAMFDT VRFWLDMGID GFRLDAVPYL YVREGTNGEN LPETHDYLHR 

       250        260        270        280        290        300 
LRRMVDEEYP GRVLLAEANQ WPFDVVEYFG TEEAPECHMC FHFPVMPRLY YALREGRATP 

       310        320        330        340        350        360 
ITEILSATPD IPTSSGQWGT FLRNHDELTL EMVTTEERAA MYGWYAPDPR MRANVGIRRR 

       370        380        390        400        410        420 
LAPLLDNSRP EIQLIHALVL SLPGSPCLYY GDEIGMGDNI WLDDRDAVRT PMQWTPDRNS 

       430        440        450        460        470        480 
GFSSADPGKL YLPTIQSLVY HYQSVNVEAQ LATGSSLLHW VRNVLAVRRA HPAFGRGRYL 

       490        500        510        520        530        540 
PLPTRDDPRP DDGSCSNEAV LAFLRVLDPT PEEEGETVLC LNNLSDHPQA AVLRMPGQAG 

       550        560        570        580 
ATARDVFGGA AFGEVDAEGT LTVMLGSRGF YWLALTGGRG VGA 

« Hide

References

[1]"Complete sequence of chromosome of Kineococcus radiotolerans SRS30216."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Lykidis A., Bagwell C.E., Shimkets L., Berry C.J., Fliermans C., Richardson P.
Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-149 / DSM 14245 / SRS30216.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000750 Genomic DNA. Translation: ABS02784.1.
RefSeqYP_001361048.1. NC_009664.2.

3D structure databases

ProteinModelPortalA6W7J5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING266940.Krad_1296.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABS02784; ABS02784; Krad_1296.
GeneID5334650.
KEGGkra:Krad_1296.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000220639.
KOK05343.
OMARMKANIG.
OrthoDBEOG6RVFV2.
ProtClustDBCLSK871760.

Enzyme and pathway databases

BioCycKRAD266940:GI4N-932-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR012810. TreS/a-amylase_N.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
TIGRFAMsTIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA6W7J5_KINRD
AccessionPrimary (citable) accession number: A6W7J5
Entry history
Integrated into UniProtKB/TrEMBL: August 21, 2007
Last sequence update: August 21, 2007
Last modified: November 13, 2013
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)