A6W0B0 (A6W0B0_MARMS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Exodeoxyribonuclease V, gamma subunit EMBL ABR72139.1

Gene names

Ordered Locus Names:

Mmwyl1_3233

Organism

Marinomonas sp. (strain MWYL1) [Complete proteome] [HAMAP] EMBL ABR72139.1

Taxonomic identifier

400668 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Oceanospirillales › Oceanospirillaceae › Marinomonas

Protein attributes

Sequence length	1131 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	purine nucleobase biosynthetic process Inferred from electronic annotation. Source: InterPro
Cellular_component	exodeoxyribonuclease V complex Inferred from electronic annotation. Source: InterPro
Molecular_function	exodeoxyribonuclease V activity Inferred from electronic annotation. Source: InterPro phosphoribosylamine-glycine ligase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A6W0B0 [UniParc]. Last modified August 21, 2007. Version 1. Checksum: 43D29E9DC26E8024	FASTA	1,131	128,774
	10 20 30 40 50 60 MFQLYTSNRL EDLAVLLAKI LAVSPPENPF DDEFILVQNP GMAQWLKMFL AESHSIAAGL 70 80 90 100 110 120 VFPLPSTFVW QTFAQSLDDI PAQSEFNKPF LVWRLMRLLD SRLGDPEFQA LSWYLEEDDT 130 140 150 160 170 180 QIRRFQLCSS IADIYDQYLV YRPDWIKSWE GGEAQDPKLT AIFEQQPWQA ILWRDLVADV 190 200 210 220 230 240 SQRGTSLYHR GNLIEALHDK TQSSARPVGV PERIFIFGVS SLPPNTLESL RVLAASGWID 250 260 270 280 290 300 VHLFLQNPCR FYWGDVVDKH YLGREIKRQT LKPGLSTDTL HLDANPLLAS WGRLGRDYIA 310 320 330 340 350 360 QLQEMADNEL VVFEDYRTEQ STGLLQWIQQ DVLTLENHGS QQERDAKIRD ASYRHPIAAD 370 380 390 400 410 420 DQSIRVHLCH SPLREVEVLH DQLLQMFESD PSLTPKDIIV MLPDVNTYSP FVKAVFGSVK 430 440 450 460 470 480 GSAQGRKHIP FALIDQSGGM ENPIVDAYLY LLGLGESRFT LSELISVLEV PAVLARFELT 490 500 510 520 530 540 ADELERIRQW STEVGIRWGL DGKTAQQHDL PMQESHTWLN GVRRMLLGYA MGHDHIWEGT 550 560 570 580 590 600 LSYGDVEGLE ASVAGKLAEF LVAINDAQAK LMESLAPKEW ISTLYYLAER FFLVDEDDAF 610 620 630 640 650 660 PALLSKQLDA LTLQWQQAHF DAPLDQQVLR QLLSPLLQES QGGQRFLAGR VNFCTLMPMR 670 680 690 700 710 720 SVPFKVICVL GLNEGDYPRS VAPMGFDLMV GQYRSGDRSR REDDKYLFLE ALMSARDCFY 730 740 750 760 770 780 ISYVGRSIQD NSEKNPSILV SELLEYIGQS CVFEGDQALT PDDAQKALLE KLILEHPLQP 790 800 810 820 830 840 FNAAYYFQPQ GSSHESTDQF DKRLYSYDEQ WLPALLSVPV DEEAQAFSPL EGLEQPRIDL 850 860 870 880 890 900 ALDELSRFIG HPTRYFTQRR LKAYLSLQEE EEKEDEPFAL DGLAGYQLRE GLLQAMLKGD 910 920 930 940 950 960 EDQFVERLSL MGALPYGALG RLSLQQSRGQ CRQLLSVLQG YALEECEPIE VNLAMGSIVL 970 980 990 1000 1010 1020 QAWLDLPTAT TRLSYRIGDL SAHQKMQMWI EHLALCAQGT PKEHHLINLT KTGKLLQHSF 1030 1040 1050 1060 1070 1080 IIIPPNDAQD YLNTMLALLQ QGLCQPIALP AKSADAWCKS YCSSKTLEDA DIAWEQALKL 1090 1100 1110 1120 1130 YQDNSSAFTR SEVDDAYWQR YFPDLNRQKA QFVSLCEQIW LPMHRHLEVI E

References

[1]

"Complete sequence of Marinomonas sp. MWYL1." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Kim E., Johnston A.W.B., Todd J.D., Rogers R., Wexler M., Bond P.L., Li Y., Richardson P. Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MWYL1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000749 Genomic DNA. Translation: ABR72139.1.
RefSeq	YP_001342074.1. NC_009654.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	400668.Mmwyl1_3233.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABR72139; ABR72139; Mmwyl1_3233.
GeneID	5368260.
KEGG	mmw:Mmwyl1_3233.
PATRIC	22469993. VBIMarSp124341_3347.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1330.
HOGENOM	HOG000258319.
KO	K03583.
OMA	NGIAQWL.
Enzyme and pathway databases
BioCyc	MSP400668:GHKD-3296-MONOMER.
Family and domain databases
Gene3D	1.10.10.160. 1 hit.
InterPro	IPR013986. DExx_box_DNA_helicase_dom. IPR006697. ExoDNase_V_gsu. IPR027417. P-loop_NTPase. IPR020559. PRibGlycinamide_synth_CS. IPR011335. Restrct_endonuc-II-like. [Graphical view]
PIRSF	PIRSF000980. RecC. 1 hit.
SUPFAM	SSF52980. Restrict_endonuc_II-like_core. 1 hit. SSF52540. SSF52540. 2 hits.
TIGRFAMs	TIGR01450. recC. 1 hit.
PROSITE	PS00184. GARS. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A6W0B0_MARMS

Accession

Primary (citable) accession number: A6W0B0

Entry history

Integrated into UniProtKB/TrEMBL:	August 21, 2007
Last sequence update:	August 21, 2007
Last modified:	May 29, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)