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A6W001 (A6W001_MARMS) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.39 EMBL ABR72030.1
Gene names
Ordered Locus Names:Mmwyl1_3120 EMBL ABR72030.1
OrganismMarinomonas sp. (strain MWYL1) [Complete proteome] [HAMAP] EMBL ABR72030.1
Taxonomic identifier400668 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaOceanospirillalesMarinomonas

Protein attributes

Sequence length408 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
   Molecular functionLyase EMBL ABR72030.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A6W001 [UniParc].

Last modified August 21, 2007. Version 1.
Checksum: C9BEB93F3A859ED9

FASTA40844,999
        10         20         30         40         50         60 
MMDRFEVTYL IHSFISLAQV AEKICNDQTT GTFTKIPDIS SRNVGCFSAE VISIEESFVS 

        70         80         90        100        110        120 
SLKQYRGRVI ISYPIDLCGY DLSAIFTIAC GGVSSIKVIE RLKIADIQFT DQFVAHFQGP 

       130        140        150        160        170        180 
KFGIEGTYRK LGMSEGPVIG GILKPNIGIT PADSANLVEQ LVAAEIDFIK DDEKLQSPPY 

       190        200        210        220        230        240 
SHVKDRIDAI MPVIDDWQQK SGKKVIYAFN ICHSDIGEIE RNHEYLKSKG GDAAVINVNQ 

       250        260        270        280        290        300 
IGICGLDSIN KFSDVILHAH TNGLAFNERS DWGISFNVWQ KVWRLLGIDH LQINGIDGKY 

       310        320        330        340        350        360 
WQGNDSVMEA YYAMTQPLGH LSATLPVFCS GQWGGQVPET YNRTGKSTEL MYLGGGGIHG 

       370        380        390        400 
HPLGAQGGVK AIRQAWDSCI SGQNIHDYAV THPELSQALS YFSHKAKQ 

« Hide

References

[1]"Complete sequence of Marinomonas sp. MWYL1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Johnston A.W.B., Todd J.D., Rogers R., Wexler M., Bond P.L., Li Y., Richardson P.
Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MWYL1 EMBL ABR72030.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000749 Genomic DNA. Translation: ABR72030.1.
RefSeqYP_001341965.1. NC_009654.1.

3D structure databases

ProteinModelPortalA6W001.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING400668.Mmwyl1_3120.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABR72030; ABR72030; Mmwyl1_3120.
GeneID5364770.
KEGGmmw:Mmwyl1_3120.
PATRIC22469757. VBIMarSp124341_3230.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1850.
HOGENOMHOG000230831.
KOK01601.
OMAGATCLMA.
OrthoDBEOG62K1SK.

Enzyme and pathway databases

BioCycMSP400668:GHKD-3182-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA6W001_MARMS
AccessionPrimary (citable) accession number: A6W001
Entry history
Integrated into UniProtKB/TrEMBL: August 21, 2007
Last sequence update: August 21, 2007
Last modified: January 22, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)