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A6VXW2

- A6VXW2_MARMS

UniProt

A6VXW2 - A6VXW2_MARMS

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Mmwyl1_2369

Organism
Marinomonas sp. (strain MWYL1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 43 (01 Oct 2014)
      Sequence version 1 (21 Aug 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMSP400668:GHKD-2411-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Mmwyl1_2369Imported
    OrganismiMarinomonas sp. (strain MWYL1)Imported
    Taxonomic identifieri400668 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaOceanospirillalesMarinomonas
    ProteomesiUP000001113: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2121 PotentialImportedAdd
    BLAST
    Chaini22 – 279258 PotentialImportedPRO_5000259472Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi400668.Mmwyl1_2369.

    Structurei

    3D structure databases

    ProteinModelPortaliA6VXW2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000293070.
    KOiK01971.
    OMAiGKGQFEN.
    OrthoDBiEOG60919Q.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    A6VXW2-1 [UniParc]FASTAAdd to Basket

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    MFQIKCLAVW LCLLPLFLFA QPDVQLANVF SEDVHVKEYL ISEKYDGIRA    50
    IWTGEKLVTR QGNPIFAPKW FTDKLPRVWL DGELWSTHND FSFIMSTVRK 100
    QTPIDSEWRK IYYMVFDAPD RERNMIFEER YKRYTRLLTI LDIPHVRPVE 150
    QFSVHNNEAL HSMLAAYVNK GAEGLMLHRK LARFERGRTD NLLKLKPHME 200
    ADAQVIEVLN GSGKYDGMMG SVLVEMPSGI RFKIGSGFSD DERNTPPNIG 250
    DHVIYKYHGF TERGIPRFAS FLRLRDTRY 279
    Length:279
    Mass (Da):32,625
    Last modified:August 21, 2007 - v1
    Checksum:i4770210DFB00A237
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000749 Genomic DNA. Translation: ABR71291.1.
    RefSeqiWP_012070070.1. NC_009654.1.
    YP_001341226.1. NC_009654.1.

    Genome annotation databases

    EnsemblBacteriaiABR71291; ABR71291; Mmwyl1_2369.
    GeneIDi5367766.
    KEGGimmw:Mmwyl1_2369.
    PATRICi22468153. VBIMarSp124341_2446.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000749 Genomic DNA. Translation: ABR71291.1 .
    RefSeqi WP_012070070.1. NC_009654.1.
    YP_001341226.1. NC_009654.1.

    3D structure databases

    ProteinModelPortali A6VXW2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 400668.Mmwyl1_2369.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABR71291 ; ABR71291 ; Mmwyl1_2369 .
    GeneIDi 5367766.
    KEGGi mmw:Mmwyl1_2369.
    PATRICi 22468153. VBIMarSp124341_2446.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000293070.
    KOi K01971.
    OMAi GKGQFEN.
    OrthoDBi EOG60919Q.

    Enzyme and pathway databases

    BioCyci MSP400668:GHKD-2411-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: MWYL1Imported.

    Entry informationi

    Entry nameiA6VXW2_MARMS
    AccessioniPrimary (citable) accession number: A6VXW2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 21, 2007
    Last sequence update: August 21, 2007
    Last modified: October 1, 2014
    This is version 43 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3