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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Mmwyl1_2369

Organism
Marinomonas sp. (strain MWYL1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMSP400668:GHKD-2411-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Mmwyl1_2369Imported
OrganismiMarinomonas sp. (strain MWYL1)Imported
Taxonomic identifieri400668 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaOceanospirillalesMarinomonas
Proteomesi
  • UP000001113 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020Sequence analysisAdd
BLAST
Chaini21 – 279259Sequence analysisPRO_5002702113Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi400668.Mmwyl1_2369.

Structurei

3D structure databases

ProteinModelPortaliA6VXW2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini117 – 228112DNA_LIGASE_A3InterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105E1T. Bacteria.
COG1793. LUCA.
HOGENOMiHOG000293070.
KOiK10747.
OMAiVRGYWDG.
OrthoDBiPOG091H05UG.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A6VXW2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFQIKCLAVW LCLLPLFLFA QPDVQLANVF SEDVHVKEYL ISEKYDGIRA
60 70 80 90 100
IWTGEKLVTR QGNPIFAPKW FTDKLPRVWL DGELWSTHND FSFIMSTVRK
110 120 130 140 150
QTPIDSEWRK IYYMVFDAPD RERNMIFEER YKRYTRLLTI LDIPHVRPVE
160 170 180 190 200
QFSVHNNEAL HSMLAAYVNK GAEGLMLHRK LARFERGRTD NLLKLKPHME
210 220 230 240 250
ADAQVIEVLN GSGKYDGMMG SVLVEMPSGI RFKIGSGFSD DERNTPPNIG
260 270
DHVIYKYHGF TERGIPRFAS FLRLRDTRY
Length:279
Mass (Da):32,625
Last modified:August 21, 2007 - v1
Checksum:i4770210DFB00A237
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000749 Genomic DNA. Translation: ABR71291.1.
RefSeqiWP_012070070.1. NC_009654.1.

Genome annotation databases

EnsemblBacteriaiABR71291; ABR71291; Mmwyl1_2369.
KEGGimmw:Mmwyl1_2369.
PATRICi22468153. VBIMarSp124341_2446.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000749 Genomic DNA. Translation: ABR71291.1.
RefSeqiWP_012070070.1. NC_009654.1.

3D structure databases

ProteinModelPortaliA6VXW2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi400668.Mmwyl1_2369.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABR71291; ABR71291; Mmwyl1_2369.
KEGGimmw:Mmwyl1_2369.
PATRICi22468153. VBIMarSp124341_2446.

Phylogenomic databases

eggNOGiENOG4105E1T. Bacteria.
COG1793. LUCA.
HOGENOMiHOG000293070.
KOiK10747.
OMAiVRGYWDG.
OrthoDBiPOG091H05UG.

Enzyme and pathway databases

BioCyciMSP400668:GHKD-2411-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA6VXW2_MARMS
AccessioniPrimary (citable) accession number: A6VXW2
Entry historyi
Integrated into UniProtKB/TrEMBL: August 21, 2007
Last sequence update: August 21, 2007
Last modified: September 7, 2016
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.