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A6VXW2 (A6VXW2_MARMS) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Mmwyl1_2369 EMBL ABR71291.1
OrganismMarinomonas sp. (strain MWYL1) [Complete proteome] [HAMAP] EMBL ABR71291.1
Taxonomic identifier400668 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaOceanospirillalesMarinomonas

Protein attributes

Sequence length279 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABR71291.1
   Molecular functionLigase EMBL ABR71291.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2121 Potential EMBL ABR71291.1
Chain22 – 279258 Potential EMBL ABR71291.1
PRO_5000259472

Sequences

Sequence LengthMass (Da)Tools
A6VXW2 [UniParc].

Last modified August 21, 2007. Version 1.
Checksum: 4770210DFB00A237

FASTA27932,625
        10         20         30         40         50         60 
MFQIKCLAVW LCLLPLFLFA QPDVQLANVF SEDVHVKEYL ISEKYDGIRA IWTGEKLVTR 

        70         80         90        100        110        120 
QGNPIFAPKW FTDKLPRVWL DGELWSTHND FSFIMSTVRK QTPIDSEWRK IYYMVFDAPD 

       130        140        150        160        170        180 
RERNMIFEER YKRYTRLLTI LDIPHVRPVE QFSVHNNEAL HSMLAAYVNK GAEGLMLHRK 

       190        200        210        220        230        240 
LARFERGRTD NLLKLKPHME ADAQVIEVLN GSGKYDGMMG SVLVEMPSGI RFKIGSGFSD 

       250        260        270 
DERNTPPNIG DHVIYKYHGF TERGIPRFAS FLRLRDTRY 

« Hide

References

[1]"Complete sequence of Marinomonas sp. MWYL1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Johnston A.W.B., Todd J.D., Rogers R., Wexler M., Bond P.L., Li Y., Richardson P.
Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MWYL1 EMBL ABR71291.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000749 Genomic DNA. Translation: ABR71291.1.
RefSeqYP_001341226.1. NC_009654.1.

3D structure databases

ProteinModelPortalA6VXW2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING400668.Mmwyl1_2369.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABR71291; ABR71291; Mmwyl1_2369.
GeneID5367766.
KEGGmmw:Mmwyl1_2369.
PATRIC22468153. VBIMarSp124341_2446.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000293070.
KOK01971.
OMAVRGYWDG.
OrthoDBEOG60919Q.
ProtClustDBPRK09125.

Enzyme and pathway databases

BioCycMSP400668:GHKD-2411-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA6VXW2_MARMS
AccessionPrimary (citable) accession number: A6VXW2
Entry history
Integrated into UniProtKB/TrEMBL: August 21, 2007
Last sequence update: August 21, 2007
Last modified: April 16, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)