A6VXV5 (A6VXV5_MARMS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Pectate lyase EMBL ABR71284.1
EC=4.2.2.2 EMBL ABR71284.1

Gene names

Ordered Locus Names:

Mmwyl1_2362

Organism

Marinomonas sp. (strain MWYL1) [Complete proteome] [HAMAP] EMBL ABR71284.1

Taxonomic identifier

400668 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Oceanospirillales › Marinomonas

Protein attributes

Sequence length	560 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL ABR71284.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pectin catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	pectate lyase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A6VXV5 [UniParc]. Last modified August 21, 2007. Version 1. Checksum: 94AA4C19BDB2D9E5	FASTA	560	64,457
	10 20 30 40 50 60 MRERIKTRIN TMQNMLDYLT HYANTILQNY RDPYHGTPLF FDGCNTFNNK PVTWKNTDGT 70 80 90 100 110 120 EWELSNIASQ QNLFRFFCGL SALTNQPKYK QAAQEAIQWH FDHADSSGLI RWGGHSFLDL 130 140 150 160 170 180 KTLNTVGPEN KNMVHELKHH CPFYELMYET NSNATSRMIK AIWNCHVTNW DNMEMSRHGS 190 200 210 220 230 240 YGLEFDEATF WDRPQNKHLE PLREMKGLSF VNIGNDLVFS AGMLYKLDHD EKALSWAEFL 250 260 270 280 290 300 MSQYVNSRHP DTKLGCYQYN RPLKTGDAPE DENDPQYTFS FWGDRAQRQF GPEYGDVAKE 310 320 330 340 350 360 AWVLFKMDEE ALNGPEGIYG DCGLAQTLLA RELGKDGKRL LDWTTEGLEA WAYYAYDANT 370 380 390 400 410 420 NEIKPMFADG KDLTGQQIPR YGYYGKKGVE IIRRPVPSHV FLAYVTNWTE NCSVGNQSNI 430 440 450 460 470 480 IWATVCAMAK HFDLGNWDSD EPNVNLQTKA DEPLFLFATL EMYQATKNAS YLTLAEKLGE 490 500 510 520 530 540 NIFERSANRE LFTASHKHIH CRFDDIEPLA LLSLIAAKQG QRELVPIYRS RGGYIHGDMM 550 560 MPDGSIKNTM DVKSIYPCTL

References

[1]

"Complete sequence of Marinomonas sp. MWYL1." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Kim E., Johnston A.W.B., Todd J.D., Rogers R., Wexler M., Bond P.L., Li Y., Richardson P. Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MWYL1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000749 Genomic DNA. Translation: ABR71284.1.
RefSeq	YP_001341219.1. NC_009654.1.
3D structure databases
ProteinModelPortal	A6VXV5.
ModBase	Search...
Protein-protein interaction databases
STRING	A6VXV5.
Protein family/group databases
CAZy	PL2. Polysaccharide Lyase Family 2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5368680.
GenomeReviews	Gene locus Mmwyl1_2362 in contig CP000749_GR.
KEGG	mmw:Mmwyl1_2362.
PATRIC	22468137. VBIMarSp124341_2438.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG41513.
HOGENOM	HBG472751.
OMA	RPMLANG.
ProtClustDB	CLSK888942.
Family and domain databases
InterPro	IPR010702. Pectate_lyase_2. [Graphical view]
KO	K01728.
Pfam	PF06917. Pectate_lyase_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A6VXV5_MARMS

Accession

Primary (citable) accession number: A6VXV5

Entry history

Integrated into UniProtKB/TrEMBL:	August 21, 2007
Last sequence update:	August 21, 2007
Last modified:	December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)