A6VX31 (A6VX31_MARMS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha amylase catalytic region EMBL ABR71010.1

Gene names

Ordered Locus Names:

Mmwyl1_2088

Organism

Marinomonas sp. (strain MWYL1) [Complete proteome] [HAMAP] EMBL ABR71010.1

Taxonomic identifier

400668 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Oceanospirillales › Oceanospirillaceae › Marinomonas

Protein attributes

Sequence length	541 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	catalytic activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A6VX31 [UniParc]. Last modified August 21, 2007. Version 1. Checksum: E78826EC06548ECE	FASTA	541	61,799
	10 20 30 40 50 60 MTDKTEWWRG AVIYQVYPRS FFDSNNDGIG DLPGVTAKMS YIASLGVDAI WLSPFFTSPM 70 80 90 100 110 120 KDFGYDVSNY CDVDTIFGTL ADFDELIASA HHHGLKVMID QVLNHSSDQH PWFVESRSSH 130 140 150 160 170 180 DNDKADWYIW ADANPDGTVP NNWLSVFGGP AWHWDSRRRQ YYLHNFLDSQ PDLNFHNPKV 190 200 210 220 230 240 IDALLETVEF WLKRGVDGFR LDTANYYYHD IELRNNPPKK EVVEGSIGVR LDNPYAYQLH 250 260 270 280 290 300 IYDKSRPENI GFLQRLRSLL DQYPGTTTVG EVGCDFALET MAAYTQGKDK LHMCYSFDLL 310 320 330 340 350 360 THDSSMTHIR NTMETIEAGL GDGWPCWSIG NHDVERVATR WGNNHDPIAK SKIYMAMLLT 370 380 390 400 410 420 LRGSVCLYQG EELGLPEAEL TFEQLVDPFG IAFWPEFKGR DGCRTPIPWK NETLGGFTKS 430 440 450 460 470 480 KQPWLPIAEA QRPLAVSEQE GNRHSVLHAY RDFLHVRRIH PELRHGDIQF IYNDETTLTF 490 500 510 520 530 540 LRSYKNKQLY VAINTANQDI ILPVDYTLTA LTMPEAIHSG YIDGKTVVLP PFSILIATVV A

References

[1]

"Complete sequence of Marinomonas sp. MWYL1." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Kim E., Johnston A.W.B., Todd J.D., Rogers R., Wexler M., Bond P.L., Li Y., Richardson P. Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MWYL1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000749 Genomic DNA. Translation: ABR71010.1.
RefSeq	YP_001340945.1. NC_009654.1.
3D structure databases
ProteinModelPortal	A6VX31.
ModBase	Search...
Protein-protein interaction databases
STRING	400668.Mmwyl1_2088.
Protein family/group databases
CAZy	GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABR71010; ABR71010; Mmwyl1_2088.
GeneID	5365180.
KEGG	mmw:Mmwyl1_2088.
PATRIC	22467547. VBIMarSp124341_2161.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0366.
HOGENOM	HOG000220640.
KO	K01187.
OMA	ENIGFLQ.
Enzyme and pathway databases
BioCyc	MSP400668:GHKD-2199-MONOMER.
Family and domain databases
Gene3D	2.60.40.1180. 1 hit. 3.20.20.80. 2 hits.
InterPro	IPR015902. Glyco_hydro_13. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR006589. Glyco_hydro_13_sub_cat_dom. IPR013781. Glyco_hydro_catalytic_dom. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
PANTHER	PTHR10357. PTHR10357. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. [Graphical view]
SMART	SM00642. Aamy. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A6VX31_MARMS

Accession

Primary (citable) accession number: A6VX31

Entry history

Integrated into UniProtKB/TrEMBL:	August 21, 2007
Last sequence update:	August 21, 2007
Last modified:	May 1, 2013
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)